Transcript Information: S_Transcript_171871.p1


Annotated TAIR IDAT1G29630.2
Annotated Gene Name5'-3' exonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10349587-10353538 | Forward length=735
E-Value6E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2300126621302
Replicate 20.83430716814132
Replicate 30.65866914584288
Condition 2: 8 Hour
Replicate 11.2992359646993
Replicate 21.7389882346006
Replicate 32.5525279695041
Condition 3: 24 Hour
Replicate 10.36714089900158
Replicate 20.80942184201241
Replicate 31.1127372531669


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171871.p1 GENE.S_Transcript_171871~~S_Transcript_171871.p1 ORF type:complete len:476 (+),score=80.86,XPG_I|PF00867.14|1.2e-23,XPG_I|PF00867.14|8.8e+03,XPG_N|PF00752.13|2.3e-22,XPG_N|PF00752.13|1.6e+04 S_Transcript_171871:190-1617(+)
ATGGGGATTCAAGGGCTATTGCCCTTATTGAAATCAATAATGTCCCCAATTAACATCAAAGATTTAAAGGGATGTTGTGTTGCTGTTGACACCTATTCTTGGCTTCATAAAGGGGCTTTGTCTTGCAGTCCTGAGCTCTGTAAGGGCTTACCCACTTCCAGGCACATTGACTACTGCATGATGAGAGTAAATTTGTTGCTTCATTACGGTGTCAAACCTATTCTTGTCTTTGATGGAGGTCTTCTACCAATGAAGAGTGAGCAAGAAAATAAGCGTGCAAGGTCTAGGAAGGAAAATCTTGCTCGGGCTGTTGAGCATGAGGCCAATGGAAATTCTACTGCTGCTTATGAATGTTATCAAAAAGCTGTTGATATTTCCCCAGCGATTGCATATGAATTGATACAGGTTTTGAAGCGGGAAGGTGTGTCCTATATAGTGGCCCCTTATGAAGCAGACGCACAAATGACCTTCTTGGCAACAGCCAAACAGGTTGATGCAGTAATTACGGAGGATTCAGACCTCATTGCATTTGGTTGTCCAAGAATTATCTACAAGATGGACAAATATGGACAAGGTGTTGAATTTCAATTTCACAAGCTACAACGTAACAAGAATCTGGATTTTACGGGATTTACCAATGAGATGATACTCGAAATGTGTATCCTAAGTGGCTGCGACTATTTGCCATCACTTCCTGGTGTGGGCCTAAAAAGAGCCCATGCTTTGATAAGCAAGTTCAAAACATTTGAGAAGGCAATTAAACACTTACGATACAGTTCTGTGTTAGTTCCTCCATTGTACGAGAAGTCATTCAAGAAAGCAGTATGGACTTTCCGGCATCAAAGAGTTTATGACCCAAACAAGGAGGATATTGTGCATCTATCAAATGTATTTGACAACATTGATGAGGATTTGAATTTCTTAGGCCCAGTGATGCCTCAACATATTGCTAAAGCCATAGCAAAAGGTGAACTCGACCCTATCACTAAACTTCCATTTCAGGTGGATAGTGTTCATCTGAGTCCGGCCTTTGGTACTTCTTATCAACTCCATGAATTTAGACCTGAAAGTGACAAGAAGAAGCTAGATTTGCCAGCTCAGAAGAATGTTATGACTAATTACTTCTGTTTTGCATCGCTAGAAGCAAAAAGAAAATTCAGGGCCCCTCGAGTCTCCCCTAAATGTTCAGGTTCAGCAGATGAATCATCCCCTACTTCACAAAACGAAGTCTGTGAAGAGGGTACTGCTTGCACACTAAATGAATCGTTAGAAGCATCGCCCAGTCAAGTAGATCTGGGTGATACTGTATCTCCTTATAGTTCAATGGAGACCGAGTTTTCTCAAAAAGAAAACAAGGATATGGATCCTCCATACCATGAGCAAATCCATTGGAGCAATCCAGATCTTCAGTTTACAAAACTTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171871.p1 GENE.S_Transcript_171871~~S_Transcript_171871.p1 ORF type:complete len:476 (+),score=80.86,XPG_I|PF00867.14|1.2e-23,XPG_I|PF00867.14|8.8e+03,XPG_N|PF00752.13|2.3e-22,XPG_N|PF00752.13|1.6e+04 S_Transcript_171871:190-1617(+)
MGIQGLLPLLKSIMSPINIKDLKGCCVAVDTYSWLHKGALSCSPELCKGLPTSRHIDYCMMRVNLLLHYGVKPILVFDGGLLPMKSEQENKRARSRKENLARAVEHEANGNSTAAYECYQKAVDISPAIAYELIQVLKREGVSYIVAPYEADAQMTFLATAKQVDAVITEDSDLIAFGCPRIIYKMDKYGQGVEFQFHKLQRNKNLDFTGFTNEMILEMCILSGCDYLPSLPGVGLKRAHALISKFKTFEKAIKHLRYSSVLVPPLYEKSFKKAVWTFRHQRVYDPNKEDIVHLSNVFDNIDEDLNFLGPVMPQHIAKAIAKGELDPITKLPFQVDSVHLSPAFGTSYQLHEFRPESDKKKLDLPAQKNVMTNYFCFASLEAKRKFRAPRVSPKCSGSADESSPTSQNEVCEEGTACTLNESLEASPSQVDLGDTVSPYSSMETEFSQKENKDMDPPYHEQIHWSNPDLQFTKLA*

Click here to download the sequence:
Link to NCBI Protein BLAST