Transcript Information: S_Transcript_171873.p1


Annotated TAIR IDAT5G55620.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22530373-22530678 | Forward length=101
E-Value1.9E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48831194926937
Replicate 21.4168763936019
Replicate 30.84599706805507
Condition 2: 8 Hour
Replicate 10.19564578272599
Replicate 20
Replicate 30.19555823490809
Condition 3: 24 Hour
Replicate 10.40082355028613
Replicate 20.41584975369445
Replicate 30.23139490279923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171873.p1 GENE.S_Transcript_171873~~S_Transcript_171873.p1 ORF type:complete len:109 (-),score=26.92 S_Transcript_171873:44-370(-)
ATGGCTTTGAAGTGGTTGTTCAACTCAGCTTTCACTCATTCACTTGTACACACAGCTGATGAAAATCAGCAAAACAAATACCAAAACAACAAACAAGCTGGTGAAAATGAGCAGAAACTTGGTTTACAAACCAAAGGAAATGCTGTTATAGGCTTCCAAATGCCTGTCAATTACCCAAGATACACTAAGGCAGAGTATGAGCAAATGGAGGAAAGGAAAGTTGATATGTTGCTAATGCAATATGGGCTGGAAAATCATATCAAGGGTACCCTTGACGAGAAGCGTAACTTTGCCATGGGGACTTTTCTGTGGCCGGATCAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171873.p1 GENE.S_Transcript_171873~~S_Transcript_171873.p1 ORF type:complete len:109 (-),score=26.92 S_Transcript_171873:44-370(-)
MALKWLFNSAFTHSLVHTADENQQNKYQNNKQAGENEQKLGLQTKGNAVIGFQMPVNYPRYTKAEYEQMEERKVDMLLMQYGLENHIKGTLDEKRNFAMGTFLWPDQL*

Click here to download the sequence:
Link to NCBI Protein BLAST