Transcript Information: S_Transcript_171920.p1


Annotated TAIR IDAT3G57680.1
Annotated Gene NamePeptidase S41 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21381054-21383629 | Forward length=519
E-Value8.5E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.487164598399
Replicate 219.84913174238
Replicate 318.134329125681
Condition 2: 8 Hour
Replicate 16.6329809347604
Replicate 26.2102456090211
Replicate 37.3429174023849
Condition 3: 24 Hour
Replicate 128.858625347106
Replicate 225.695759613317
Replicate 325.053335077992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171920.p1 GENE.S_Transcript_171920~~S_Transcript_171920.p1 ORF type:5prime_partial len:299 (-),score=47.83,Peptidase_S41|PF03572.14|1.2e-49,PDZ|PF00595.20|2.3e-07,PDZ|PF00595.20|8.3e+03,PDZ_2|PF13180.2|2e-06,PDZ_2|PF13180.2|5e+03 S_Transcript_171920:160-1056(-)
GATAGCCCAGCTGCCCGTGCAGGTATTCATGAAGGGGATGAGCTAGTTGAGATCAATGGAGAAAGAGTTGATGGTATTAATAGTGAGACAGCAGCACAGAGGCTCCGAGGACGTGCTGGGACAACTGTCAAGATTAAAGTCCACAGTGGAAACGATACTCTGAACCGTTCAAATTTCAGAGAGGTCAATCTTCCGAGAGAGTACATTAAGCTTTCACCAATTTCCAGCACCATTATCCCCCATAAAAGCCCGGATGGACATCTGACAAAGACGGGGTATGTAAGGTTATCAGCCTTCTCTCAGACTGCTGCTTCTGACATGGAGAAAGTCATCCGCCAATTGGAAGATAAGGGTGTTCGTTCATACATATTAGACTTGAGGAACAATCCGGGAGGTCTAGTTAAAGCAGGGCTTGACGTTGCTCAAATGTGGCTTGATGGAGAGGAAACTCTAGTGTACACAACCGATAGAGATGGACATATATTTCCCATCAATATGGTCGACGGTCACGCTGTAACACACGACCCTCTTGTCATCCTTGTGAACGAGGGAAGTGCTAGTGCGAGTGAGATTCTGGCAGGAGCTCTTCACGACAATGGTCGTGCTATCCTTGTAGGACACAGAACTTTTGGAAAAGGGAAAATTCAGAGCGTCATGGAACTGCACGATGGATCAGCCTTGTTTGTCACTGTTGCAAAGTACTTGTCACCATTACGACATGAAATAGACAAGATAGGCATAACGCCTGACGTTCAGTGCACAACTGAGATGCTGAATGCACCGAAGGAACTGGTGGTGAAGGGCACGTACACAGCGTCTAATCTGGAAGCGGATTCTTGCATAATGGTAGCTGAACATGAATTGGACATCCAGCAGTCAAAAGGGACTGCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171920.p1 GENE.S_Transcript_171920~~S_Transcript_171920.p1 ORF type:5prime_partial len:299 (-),score=47.83,Peptidase_S41|PF03572.14|1.2e-49,PDZ|PF00595.20|2.3e-07,PDZ|PF00595.20|8.3e+03,PDZ_2|PF13180.2|2e-06,PDZ_2|PF13180.2|5e+03 S_Transcript_171920:160-1056(-)
DSPAARAGIHEGDELVEINGERVDGINSETAAQRLRGRAGTTVKIKVHSGNDTLNRSNFREVNLPREYIKLSPISSTIIPHKSPDGHLTKTGYVRLSAFSQTAASDMEKVIRQLEDKGVRSYILDLRNNPGGLVKAGLDVAQMWLDGEETLVYTTDRDGHIFPINMVDGHAVTHDPLVILVNEGSASASEILAGALHDNGRAILVGHRTFGKGKIQSVMELHDGSALFVTVAKYLSPLRHEIDKIGITPDVQCTTEMLNAPKELVVKGTYTASNLEADSCIMVAEHELDIQQSKGTAS*

Click here to download the sequence:
Link to NCBI Protein BLAST