Transcript Information: S_Transcript_171981.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeHomolog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.056718791629
Replicate 214.749157659996
Replicate 317.220013249329
Condition 2: 8 Hour
Replicate 15.7731719643067
Replicate 28.40489341161
Replicate 35.4172872366251
Condition 3: 24 Hour
Replicate 118.344874533538
Replicate 219.658665289981
Replicate 312.820044670004


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171981.p1 GENE.S_Transcript_171981~~S_Transcript_171981.p1 ORF type:complete len:181 (-),score=35.53,Asp|PF00026.19|2.2e-41 S_Transcript_171981:1320-1862(-)
ATGCAGATTTTCATCGAGGCAATCAATGAAGAAAGCCCCATTTTGGCATTGGCTAAGTTTGATGGTGTCTTGGGACTTGGATTTCAGGAAGCTTCTATTGGAAATGTTACACCCATATGGCAAGGAATGGCAGAACAAGGGCTACTAAGGAGAAATGTTTTCTCAGTGTGGTTTAACAGAAACCCAAAAGCAGAATTAGGGGGGGAGGTGGTTTTCGGAGGAGCTGATCCGAAGAATTTCAAGGGAAAGCATACTTATGTTCCTGTAACTCAGAAAAATAGTATATGGCAGATTGACATTGGTGAATTCTTCATTGGGAACAGACCATCTGGCTATTGCGCGGAAGATTGTAGTGCAGTGCTCGACTCAGGATCACCATTACTATCAGCCCCTACTGTTGTTGTTACTGAAATCAACCATGCAATAGGAGCAAAAGGTGTCATAAGCGCAGAGTGCAAAGAAGTCGTCTCCCAGTATGGAGACATGATATGGGATGTTTTGGTGTCGAAGGTCTCTGAAACATTTCCAAACTCTTTTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171981.p1 GENE.S_Transcript_171981~~S_Transcript_171981.p1 ORF type:complete len:181 (-),score=35.53,Asp|PF00026.19|2.2e-41 S_Transcript_171981:1320-1862(-)
MQIFIEAINEESPILALAKFDGVLGLGFQEASIGNVTPIWQGMAEQGLLRRNVFSVWFNRNPKAELGGEVVFGGADPKNFKGKHTYVPVTQKNSIWQIDIGEFFIGNRPSGYCAEDCSAVLDSGSPLLSAPTVVVTEINHAIGAKGVISAECKEVVSQYGDMIWDVLVSKVSETFPNSFS*

Click here to download the sequence:
Link to NCBI Protein BLAST