Transcript Information: S_Transcript_171990.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeHomolog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.189173350827
Replicate 216.927485091541
Replicate 315.898910416897
Condition 2: 8 Hour
Replicate 113.236449162358
Replicate 214.271696546032
Replicate 313.781798020462
Condition 3: 24 Hour
Replicate 115.065436890065
Replicate 222.663811576347
Replicate 320.003690390264


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_171990.p1 GENE.S_Transcript_171990~~S_Transcript_171990.p1 ORF type:5prime_partial len:116 (+),score=16.47,Asp|PF00026.19|5.6e-22,TAXi_C|PF14541.2|5.3e-06 S_Transcript_171990:1-348(+)
CAGAATCAGATCAAACAGAGGACTTCAAAGAAGCAAACCTTGCTCTATGTTAATGAGCTCTGCAATAGCTTTCCAGGTCCGGAAGGAGATGTAGCAGTAGACTGTGATCATATCCCAGACATGCCGAATTTGACATTGACAATCGGAAATAAACCATTCACTCTCACTCCTAAGCAGTACATTCAAATAACTAAAGAAGGCGATAAGATGGCTTGCCGATCCCAGTTCTCTGCAGTGGATCTGGAGTCTCCTCGTGATGCATGGATCCTAGGGAATGTTTTCATGCAAGCGTATCATACTATCTTCAACTTTGGCAATCATCGAGTGGGTTTCGCTGAAGCAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_171990.p1 GENE.S_Transcript_171990~~S_Transcript_171990.p1 ORF type:5prime_partial len:116 (+),score=16.47,Asp|PF00026.19|5.6e-22,TAXi_C|PF14541.2|5.3e-06 S_Transcript_171990:1-348(+)
QNQIKQRTSKKQTLLYVNELCNSFPGPEGDVAVDCDHIPDMPNLTLTIGNKPFTLTPKQYIQITKEGDKMACRSQFSAVDLESPRDAWILGNVFMQAYHTIFNFGNHRVGFAEAA*

Click here to download the sequence:
Link to NCBI Protein BLAST