Transcript Information: S_Transcript_172009.p1


Annotated TAIR IDAT5G14050.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4533539-4535179 | Forward length=546
E-Value8.4E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.675470691395
Replicate 214.511401791438
Replicate 313.347217248131
Condition 2: 8 Hour
Replicate 113.49875222136
Replicate 212.592813770403
Replicate 313.580612185442
Condition 3: 24 Hour
Replicate 19.8639783184332
Replicate 29.8599262734212
Replicate 39.4127629635588


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172009.p1 GENE.S_Transcript_172009~~S_Transcript_172009.p1 ORF type:5prime_partial len:485 (+),score=108.53,WD40|PF00400.28|2.8,WD40|PF00400.28|0.2,WD40|PF00400.28|2.5e+02,WD40|PF00400.28|1.4e+04 S_Transcript_172009:3-1457(+)
TTGTTCGGTGCTGTGCATTCACCGGTTAGATTTGGGGAGGATGGTGATGATGAAGTGGTAGGTGGGGTTGATGATGATGATGACGCTCCTTTGTTTGTTATGGATCATTCGGGGAGTAATGCTATGTCGGTTGATGAATCGGATGCTGGATTGCAATTGGCAGTTGTTGATCGAGATGGTGATAAGCAACGGAAACCTGCTTGGGTGGATGACGAGGAGGAGAAGACTGCCATTAACATTGCGAAAGTTAATAGGTTGAGGAAGTTGCGGAAAGAGGAAGATGAGGCGATTATATCAGGTTCAGCGTATGTGTCAAGGTTAAGGGCCCACCATGAGAAACTGAACCCTGGCACAGATTGGGCGCAGTTTGGTTCAAAGACAAAAGGATACGACTCTGATGAAGAAGAGTCTGAGGTAATAAATGGGCCAGTGGTAGACATTCTACGAACAAATGAGGAGCTTGTTATGAAGAGAGGTGTAAAGCTACTTCCAGGGATCCTAGAGTACTCGAAACTTAGAGATGCAAATGTGGAAGATCCTTCCAGCGGTCCAATAAATTCTGTCCAGTTCCACAGAAATCATCAGTTGCTACTTGCTGCTGGATTAGATAAAAAATTGAGGTTTTTCCAAATAGATGGAAAGCGGAACAAAATGATGGATTCTATCTTCTTTGAAGACTGCCCTATTTGGAAAGCATCTTTCTTACCAGATGGCTCACAAGTTATTTTATCTGGTAAGAGAAAGTTCTTCTACAGCGTTGACGTAGTCAAGGGCAATGTTGATAAGATTGGGCCACTTACTGGCAGAGAGGAAAAGAGCTTGCAAGCTTTTGAGGTTTCCCCGGATTCTCGTACTATAGCCTTTGTGGGAAATGAAGGTTACATCCTGTTGGTATCATCCAAAACAAAGCAACTAATAGGGACGCTTAAAATGAATGGAACAGTCCGCTCACTAGCTTTTACTGCTGATGGGCAACAATTATTGAGTTCTGGTGGTGATGGGGAAGTATACCACTGGGATTTGAGGACAAGAACTTGCTTCCATAAGGGTGTAGATGAAGGATGCATAGATGGTACCGCTCTTTGTACTGCACCAGTAGGGAATCTATTTGCAGCTGGCTCGTCCAGTGGGATTGTTAATGTTTACAACAGGGAAGAATTCTTGGGTGGCAAGAGGAAACCGCTCAAGACCCTCGAGAATCTGACAACCAGAATAGATTCCATGAAGTTCAACCATGATGCCCAAATATTAGCTTTGTGTTCAAGACAGAAGCAAAACAGCCTAAAGCTGGTACACATCCCTTCTTTCACAGTCTTTTCTAACTGGCCTCCACCAAATAAAAAGCTACACTCTCCTAGCTGTTTGGATTTTAGCCCTGCTGGTGGTTTCATGGCTGTCGGAAATGCAGCCGGAAAAGTATTGTTATACAAGTTGCATCATTACCAGCAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172009.p1 GENE.S_Transcript_172009~~S_Transcript_172009.p1 ORF type:5prime_partial len:485 (+),score=108.53,WD40|PF00400.28|2.8,WD40|PF00400.28|0.2,WD40|PF00400.28|2.5e+02,WD40|PF00400.28|1.4e+04 S_Transcript_172009:3-1457(+)
LFGAVHSPVRFGEDGDDEVVGGVDDDDDAPLFVMDHSGSNAMSVDESDAGLQLAVVDRDGDKQRKPAWVDDEEEKTAINIAKVNRLRKLRKEEDEAIISGSAYVSRLRAHHEKLNPGTDWAQFGSKTKGYDSDEEESEVINGPVVDILRTNEELVMKRGVKLLPGILEYSKLRDANVEDPSSGPINSVQFHRNHQLLLAAGLDKKLRFFQIDGKRNKMMDSIFFEDCPIWKASFLPDGSQVILSGKRKFFYSVDVVKGNVDKIGPLTGREEKSLQAFEVSPDSRTIAFVGNEGYILLVSSKTKQLIGTLKMNGTVRSLAFTADGQQLLSSGGDGEVYHWDLRTRTCFHKGVDEGCIDGTALCTAPVGNLFAAGSSSGIVNVYNREEFLGGKRKPLKTLENLTTRIDSMKFNHDAQILALCSRQKQNSLKLVHIPSFTVFSNWPPPNKKLHSPSCLDFSPAGGFMAVGNAAGKVLLYKLHHYQQA*

Click here to download the sequence:
Link to NCBI Protein BLAST