Transcript Information: S_Transcript_172126.p1


Annotated TAIR IDAT3G49890.1
Annotated Gene Nameunknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18499296-18500501 | Forward length=220
E-Value4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8441375365842
Replicate 23.3683648179412
Replicate 34.6458800821284
Condition 2: 8 Hour
Replicate 13.4185740203038
Replicate 23.9278818222421
Replicate 31.4644475453804
Condition 3: 24 Hour
Replicate 13.8353612235394
Replicate 20.69202478095717
Replicate 32.8880203517308


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172126.p1 GENE.S_Transcript_172126~~S_Transcript_172126.p1 ORF type:5prime_partial len:131 (+),score=31.36 S_Transcript_172126:3-395(+)
GGCATAATTTTTGATCACAGAGGTATATCTTTGTTTTCCTTATGGTACAATTCCAGTTCACATCAGGATTTGATTTTGTGGTCTTTGATTATTTTAGATGAACCTAAGGGACCAAGAAAGAAACCCAGGATCCTTCCCGGTGAAGAGATTGATGAAAAATCAAAAAAGTTCAAAAGAAGACTGAATTCTGTAGCAGTTGAGGGAATGGATATTTTAATGTCTGCTAAGGAAGCATGCCAGAAGTCTCTGGTTAAATTTGAGTCAAAACAAGCGACTGCAAGAGATGCTGCTAAGAGGGAGGAAGAAAGAGTAGCTCAATTGAAGAAAATCAGGGGAGAGAGATGGCTTCCATCTATTGCTAGAGAAATGCAGGTGAAATTCAAAGGCCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172126.p1 GENE.S_Transcript_172126~~S_Transcript_172126.p1 ORF type:5prime_partial len:131 (+),score=31.36 S_Transcript_172126:3-395(+)
GIIFDHRGISLFSLWYNSSSHQDLILWSLIILDEPKGPRKKPRILPGEEIDEKSKKFKRRLNSVAVEGMDILMSAKEACQKSLVKFESKQATARDAAKREEERVAQLKKIRGERWLPSIAREMQVKFKGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST