Transcript Information: S_Transcript_172172.p1


Annotated TAIR IDAT4G35260.1
Annotated Gene Nameisocitrate dehydrogenase 1
Annotated Gene Symbol(s)IDH1, IDH-I
Annotation TypeOrtholog
Chromosome Positionchr4:16774494-16776233 | Reverse length=367
E-Value3.4E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6373244467296
Replicate 22.3851664386502
Replicate 32.1599600818631
Condition 2: 8 Hour
Replicate 12.8818095023153
Replicate 22.6201264172653
Replicate 32.1123812941873
Condition 3: 24 Hour
Replicate 11.5744060173401
Replicate 23.3689449640516
Replicate 34.8853509433333


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172172.p1 GENE.S_Transcript_172172~~S_Transcript_172172.p1 ORF type:5prime_partial len:222 (+),score=48.59,Iso_dh|PF00180.16|2e-58 S_Transcript_172172:3-668(+)
AGGGAGAATACTGAGGGCGAGTATTCTGGGTTGGAGCATGAGGTTGTTCCTGGGGTCGTTGAGAGCCTTAAGGTGATAACAAAGTTCTGCTCTGAACGGATTGCAAAGTATGCGTTTGAATATGCTTACTTGAACAACAGGAAGAAAGTGACTGCTGTGCACAAAGCCAACATTATGAAACTCGCAGATGGTCTGTTCTTAGAATCCTGTCGGGAGATTTCACAACAATATCCGAGCATCGAGTACAATGAGATTATCGTGGATAACTGCTGTATGCAGCTTGTGGCAAAGCCAGAGCAATTTGATGTGATGGTTACCCCCAATCTATATGGTAATTTAGTGGCTAATGTGGCTGCTGGTATAGCCGGAGGAACTGGGGTCATGCCAGGCGGCAATGTTGGTGCTGATCACGCTGTATTTGAGCAAGGTGCTTCAGCAGGAAATGTAGGAAAGCTGGAAATGGTGGAACAGAAAAAGGCAAACCCCGTAGCTCTGATCCTTTCTTCTGCTATGATGCTAAGGCATCTGCAGTTCCCTTCCTTTGCAGATCGTTTGGAGACGGCTGTTGGGCGCGTAATTGAAGAGGGCAAGTACCGAACAAAAGATCTTGGTGGGACAAGTACCACGCAAGAGGTCGTTGATGCTGTTATTGCCAATTTGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172172.p1 GENE.S_Transcript_172172~~S_Transcript_172172.p1 ORF type:5prime_partial len:222 (+),score=48.59,Iso_dh|PF00180.16|2e-58 S_Transcript_172172:3-668(+)
RENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREISQQYPSIEYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANVAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKLEMVEQKKANPVALILSSAMMLRHLQFPSFADRLETAVGRVIEEGKYRTKDLGGTSTTQEVVDAVIANLE*

Click here to download the sequence:
Link to NCBI Protein BLAST