Transcript Information: S_Transcript_172210.p1


Annotated TAIR IDAT5G45790.2
Annotated Gene NameUbiquitin carboxyl-terminal hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18572345-18573664 | Forward length=439
E-Value4.9E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1324681376673
Replicate 21.1474736885705
Replicate 30.82839712905062
Condition 2: 8 Hour
Replicate 13.2265365964457
Replicate 22.2742068357169
Replicate 33.3258769312737
Condition 3: 24 Hour
Replicate 11.4976397664946
Replicate 20.53578750771507
Replicate 31.5502911454681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172210.p1 GENE.S_Transcript_172210~~S_Transcript_172210.p1 ORF type:complete len:423 (+),score=65.04,PORR|PF11955.4|4.4e-105 S_Transcript_172210:214-1482(+)
ATGAGACCCCTACTGTCAAAAACCCTGAAAAACAACCAACTTCCATGTCACCCATCATCAAAATCACCATACCCATTTGGTCCCTTCAACTCCTTCACGCAAAGGAGGTGGAAAAAGCCAGCTGACACTGCCCAAACCCGCTTAGAGAACCGAACCCGGGACCTTAAACTTGACAAGTTGACTTCCCAATTCAGGAAACTCAAACTTGCCCTCCACCTGTTCGACTTAATGTCTCAAAGGCGTAGCCCTTTTGTTTCGGTACAATTAATGTCTCGATGGACCAATGTGGTTGGTCTTAACGTTAGTATGGGTGATTTCCTTAGGGAATACCCCCATGTTTTCGAGGTATTTACTCACCCTGTGAGGAAGAATGTGTGTTGTAGGATGAGGAGTAGTATGCTTGGTTTGATTGAGAAAGAAGCGGTTGTTATTAAGGAATATGAGTTAGAAAATGTTAGGAAGTTGAAGAAGCTTTTGATGATGTCGAGAAATGGTACCCTTCATTTACATGCTTTGCGATTGGTGAGTCAAGAATTGGGATTGCCCAAGGATTTTAGAGAGTCCATAATAAGAAAGTATGAAGATGACTTTAGGTTGGTTGATGCCGAGGTAGTGGCGCTAGTGGAGAGAGATGAGGGTTTGGCTGTTGCAAAAGTTGAAAGTTGGAGAGAAAGAGAATATAGGGAGAAGTGGTTGAGTGAATTCGAGACCAAGTATGCATTTCCAATAAACTTTCCAACGGGTTTCAAGATTGAGAAAGGATTTAGAGAGAAGTTAAAGAATTGGCAAAGAATGCCTTATGTCAAGCCTTATGAAAAAGAGGTTACACGAAGTCGTACTAGTGGTGGGATTGAGCCTTTTGAGAAAAGGGTTGTAGGGATTTTACATGAGTTCCTGAGTTTGACAGTTGAGAGAATGATCAATGTTGAAAGATTGGTTCACTTCCGGAAGGATTTAGGTATTGAAGTTAATATGCGTGAACTTTTGTTAAAGCATCCTGGGATATTCTATATCTCTACGAAAGGAAACTCTCAAACACTTTTTCTTAGAGGAGCATATAGCAAAGGTTGTTTAGTTGAGCCAAGTCCACTCTATATTGTCAGGAGAGAAATGCTGGACCTCATGTTGCTTGGTGACCGTAACACTAAAGAGTTGAAGTTTGATCAAGCAAGTCGGGAGCAAAATGAAAATCTAGTGACTGATATGAGTGTGGAAAGTAAGAAAGATGGAGACTGGATCATACCTCTTTTAGAGAGGTCTTGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172210.p1 GENE.S_Transcript_172210~~S_Transcript_172210.p1 ORF type:complete len:423 (+),score=65.04,PORR|PF11955.4|4.4e-105 S_Transcript_172210:214-1482(+)
MRPLLSKTLKNNQLPCHPSSKSPYPFGPFNSFTQRRWKKPADTAQTRLENRTRDLKLDKLTSQFRKLKLALHLFDLMSQRRSPFVSVQLMSRWTNVVGLNVSMGDFLREYPHVFEVFTHPVRKNVCCRMRSSMLGLIEKEAVVIKEYELENVRKLKKLLMMSRNGTLHLHALRLVSQELGLPKDFRESIIRKYEDDFRLVDAEVVALVERDEGLAVAKVESWREREYREKWLSEFETKYAFPINFPTGFKIEKGFREKLKNWQRMPYVKPYEKEVTRSRTSGGIEPFEKRVVGILHEFLSLTVERMINVERLVHFRKDLGIEVNMRELLLKHPGIFYISTKGNSQTLFLRGAYSKGCLVEPSPLYIVRREMLDLMLLGDRNTKELKFDQASREQNENLVTDMSVESKKDGDWIIPLLERSCD*

Click here to download the sequence:
Link to NCBI Protein BLAST