Transcript Information: S_Transcript_17234.p1


Annotated TAIR IDAT1G55000.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20514762-20516166 | Forward length=221
E-Value4.6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.123249569839
Replicate 257.840286137269
Replicate 353.761643795824
Condition 2: 8 Hour
Replicate 1121.11833651159
Replicate 2113.67317687212
Replicate 3104.19252149771
Condition 3: 24 Hour
Replicate 161.064461958263
Replicate 260.290989096924
Replicate 361.448301234086


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17234.p1 GENE.S_Transcript_17234~~S_Transcript_17234.p1 ORF type:complete len:259 (+),score=23.01,F-box-like|PF12937.3|9.5e-06,F-box|PF00646.29|2.3e-05 S_Transcript_17234:102-878(+)
ATGGGGTGCTGTGGAGACGAACAAGAAGACGATAACCTCCACGAACCCCTCATCAACCCTACCACCACCTCTCCCGAATCCCTAGAAACCATAATTTCACCAATGAACTCGAATTTCGCAGCCCTAATTTGCAGAGATACGCTCCGTATCATCTTCGAGAAGCTTCCGATCGCCGATTTAGCTCGAGCTGCTTGCGTGTGCCGTCTATGGTCCTCGATCGCCTCCGATCGTGAAATCCAAACGGCGTCGTTTATTGCGCCTTGGAAATTGAAGGAGATTGTCGGTGATCCGAGTTCTGGAAGCTTCTGGAGAGATAATAGCTTGAGCAAGTTCGCCATTTCTCATCGCCTTGTTCGCGGTGATTCTCTCGCTAGCCTTGCTGTTAAGTACTCCGTTCAGGTTGTGGACATAAAACGACTGAACAACATGATGAGTGACCATGGCATATATTCACGGGAAAGATTGCTCATCCCTGTGAGCAATGCAGACATCCTTATCAACAGTACATGCTACATAGAGCTGGACTTTCACGCAAAAAGAGAAGTTGCAGTGTTATATCTAGAGGGAGGACCAGAAGGTAAAACGTCCCGCTACTCACCTAGTAGGGTGAGCTCCGAACATGGTAAGAGAAGAGTGATTGAATCCCTGAGGAGGAGCATGCAAGTCGATGATGGAACTGCTCTGTATTATTTGTCTATATCAGATGGTGACCCTCGAGCTGCACTTTCAGAGTTCTCAGATGACATCAGATGGGAAAGGCAAGCAGGCGTCACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17234.p1 GENE.S_Transcript_17234~~S_Transcript_17234.p1 ORF type:complete len:259 (+),score=23.01,F-box-like|PF12937.3|9.5e-06,F-box|PF00646.29|2.3e-05 S_Transcript_17234:102-878(+)
MGCCGDEQEDDNLHEPLINPTTTSPESLETIISPMNSNFAALICRDTLRIIFEKLPIADLARAACVCRLWSSIASDREIQTASFIAPWKLKEIVGDPSSGSFWRDNSLSKFAISHRLVRGDSLASLAVKYSVQVVDIKRLNNMMSDHGIYSRERLLIPVSNADILINSTCYIELDFHAKREVAVLYLEGGPEGKTSRYSPSRVSSEHGKRRVIESLRRSMQVDDGTALYYLSISDGDPRAALSEFSDDIRWERQAGVT*

Click here to download the sequence:
Link to NCBI Protein BLAST