Transcript Information: S_Transcript_172360.p1


Annotated TAIR IDAT5G09840.1
Annotated Gene NamePutative endonuclease or glycosyl hydrolase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3059027-3061970 | Forward length=924
E-Value7.8E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75887614141616
Replicate 20.71590172605505
Replicate 30.74351246748046
Condition 2: 8 Hour
Replicate 11.7194513333382
Replicate 21.6938371143156
Replicate 31.7396414466209
Condition 3: 24 Hour
Replicate 10.47255401847893
Replicate 20.35655947416082
Replicate 30.69441223534243


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172360.p1 GENE.S_Transcript_172360~~S_Transcript_172360.p1 ORF type:5prime_partial len:1017 (+),score=225.21,NYN|PF01936.14|1.4e-25,NYN|PF01936.14|1.4e+04,OST-HTH|PF12872.3|3.7e-06,OST-HTH|PF12872.3|3.2e-05 S_Transcript_172360:1-3051(+)
TCATCATCATTATCATCATCATCAAGACGTCATCATCATGATGAGGAGAGTAGAAATGTGAAGGTTTCAGTGTGGTGGGACATAGAGAATTGCAGTGTACCAAATGGGATTAATGTGTTCAAGATAGCTCAGTCAATTACATCAGCTGTTAGGGTTAATGGGATTAAAGGTCCCGTCCAAATTTCGGCCTTTGGGGATGTTCAGTACCTTTCTAGGTCTAATCAAGAAGCTTTGTCTTCTACTGGTATCAGTCTCATTCATGTTCCTCAAGGAGGAAGGAACAGTGCTGACAGGTCCCTTCTTGTGGATCTTATGTACTGGGTAACCCATAATCCACCACCTGCACATATTTTCTTGATATCTAGTGACAGGGATTTTGCTGGTATTTTACACAGATTGAGAATGAACAACTACAATATACTGCTTGCTGGTAAAGATGACAAACATACGCCTGGTGTTCTCTGTAGTGCTGCAAGCATCATGTGGCATTGGAATGAATTAGCTAAAGGAGAAAACCTTTCGGGTAGACATTTTAACCAGCCACCAGACGGCCCCTTCAATTCTTGGTATGGGCACTATAGAGGCCCCCTTGAGAATCCATTCGATGCACCGGAGCAGCAAGGCTCTTCAAAGGCTAATAATCCATTACTCGTTGAGCCCTTGTCAGACAAGAATCATCCAACACCGAAGGCTGTTTTGAAGCAGATTCGTCAAATAGTTAATTCATATCCAAATGGACTCTCCATTGTTGAACTTCGTGCGCAGCTGGCAAACAGTAATGTGCCACTTGACAAAAACTTCTATGGTTTTAAAAAATTTTCTAGCTTTTTGCTGTCAATCCCCCACATTTTGAAAGTTGTGCCTCTTGCTGATGGTCAGTTCCTGCTACGTCCTGCTTCTTCGAATGTCCTAGGATCTGGCAAAAGTGATGATATATCTGCAGAGTCCATAACTGACAAGGAAAACCAGGATAGCAAGGTGAGTGCAAAAGCTAATTCTGAGACTCATTCAATAACTAGAATGGTGGAGGAGAAGAGAAGGTTGCCAGTGTCCTCTTATGATGATGTGAAAGAGAAAACAGTTGAAGAGAAGATGAAACAAGCACAATCAGTTAAAGATAAGATAAAAGAAGAGCAAACAGTTGAGGAGAAGATGAAAGAGATCCCTGAGAAAAAGGTGTCAGGTGCTCCTTTAAGGGACGATCATCACGTTGCTTCTATGAAGGAATATCGTAGCGAGGAACCATTGGATGCGCAGGAGTCTAAGTGTGTTGGAACTTCTACCGCTGAACAAAGTAGTCTTGCGAATTCTAGTGAGCAACAAAAATCAAAGAGTGAAAAAGCGGGTATTTTCAAAAGATTGTGGATGAGATGGCTTGGTAGAAGTTTTGAAAATGAAAATATAGATCTTACTAGTCCTGATAAATATAATACCTCTGATTGTAGCCCTGAAAAGTCAATTTCTGAAGAAGGGTATGCCCAAGCGACCAATGAACAAGAAACTTGTGGTCCATCGCTTTCTTCTTCCAGTACTGCATTACATGTTAATGGAACTAGTGATACAGTTTCTAAATCTGAAGCTAGTCCAGGTTTTATTCCGAAGATCTTAAGCTGGTTCAGTTATTGGAGAAATGAGTCACCTGTATCTACTGTAACTGAACAAATGAGTAAAGAACCTAGCGACTCAAGGAATCATGAGGATAGTCCACAAACAAGTAAACATGAAGATGCTCCACAATTGAACAGGGATGACGTTGCTTCAGAGCTCAGGCAGCCCATAGATGCCTCACAGTCAACGAAGCACGAAGTTGCTCCACATTGCAGGAAGGGCGAAATCGCTTTGCAGTCAAGAAAGCACGGAGATGCTCCAGGTTCAAAAAAACTTGAACTGTTGAAGAATTTCCCATGGAGTGATGTCGAATTGTTCCTTAGAACTTACAGAGGATCAGAAATTGTCTTAGACTCGGCTTCAAGGTTGAACCTTGCAAAAAGGCTAAAGATGGAAGGATCTCAGGCTCTTCGATGTCTTCAGGAAAGTGATCTTCTTCAATTGGTAGATGCTTTAGTTTCAGAGAAGAAGTGGATTAAAGAATTCCCCGCTAAAAATCCTCGTTTTAGTATTCATCTCCCTCCAGCCCATAATTCAAGGAAGTTAAGTTATATTTATTCAAGCTCATCCCAGAAAAATGGTCAGTTGGGTGTCCCATCTCCTACACACAAGAACCCTTCTGAAAAGCCCCGAAGTGAGATCTTGGCAGACTGTCAACAGCTCTTGGATGAGCTTTTACAGGAAAACCCTGAAGGCTTCAACATGGGTTTGTTTAAAAAGAAGTTTTACGACAAGTTTGGATATATTCTTGACTACCAGAAGCTTGGTTATGCTAAAATGGTGTCCCTTTTACAGATGATGCCCGGAGTTAAAGTAGAATGCCGTGAGGTTCTGCCTGATAGAGTGGTTTATGCTCCTGGCATCAGATCCTTGGGCTCAAACAAGAAGTTAGCTGGTTCAGATAGTGACATGTCTGATTCTCAACTGATGGATGAGGATGCCGAATCTCCCTGGGAGGAACTTGGACCTGTTTCAAAGTCAAATCTTTCTAAACAGGATGAGGATTTTGGTCTAAGCAACAAAAGCAGCAAGTACGAGCCATCAGTAGCGGAGGATGATGAATTGTCTGACACAGAAGATGAGTCGTCATCCTGCGCTAAAACAGAAGATCAAAGTAGATCAAAGGTAAACAATGAAGACAGCTCGTTATTGCAAATCTTGAATTCATGGTATAGCATTAAGGAGGAAGGCAATCCGAAGGATCATGATTCAGATGTCGAGGGCTTGGTAGATTGTTCTAACGAGGATTCGAGGGCGTCTGGCTCATCTTCCAATGGTATTAAAGATGATGCTTCTTCCAAAGTCAACATTGCATGGACATTACAGAAGCTACAAAAGAAATACAACTTTGTTTCGGAGTCTTCTGAGAGCAAGAAAGACCAGCTAATCGATGGCATATTGGGTACCTTGAAGAAGTCTGGCGACTCGAGGATGCAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172360.p1 GENE.S_Transcript_172360~~S_Transcript_172360.p1 ORF type:5prime_partial len:1017 (+),score=225.21,NYN|PF01936.14|1.4e-25,NYN|PF01936.14|1.4e+04,OST-HTH|PF12872.3|3.7e-06,OST-HTH|PF12872.3|3.2e-05 S_Transcript_172360:1-3051(+)
SSSLSSSSRRHHHDEESRNVKVSVWWDIENCSVPNGINVFKIAQSITSAVRVNGIKGPVQISAFGDVQYLSRSNQEALSSTGISLIHVPQGGRNSADRSLLVDLMYWVTHNPPPAHIFLISSDRDFAGILHRLRMNNYNILLAGKDDKHTPGVLCSAASIMWHWNELAKGENLSGRHFNQPPDGPFNSWYGHYRGPLENPFDAPEQQGSSKANNPLLVEPLSDKNHPTPKAVLKQIRQIVNSYPNGLSIVELRAQLANSNVPLDKNFYGFKKFSSFLLSIPHILKVVPLADGQFLLRPASSNVLGSGKSDDISAESITDKENQDSKVSAKANSETHSITRMVEEKRRLPVSSYDDVKEKTVEEKMKQAQSVKDKIKEEQTVEEKMKEIPEKKVSGAPLRDDHHVASMKEYRSEEPLDAQESKCVGTSTAEQSSLANSSEQQKSKSEKAGIFKRLWMRWLGRSFENENIDLTSPDKYNTSDCSPEKSISEEGYAQATNEQETCGPSLSSSSTALHVNGTSDTVSKSEASPGFIPKILSWFSYWRNESPVSTVTEQMSKEPSDSRNHEDSPQTSKHEDAPQLNRDDVASELRQPIDASQSTKHEVAPHCRKGEIALQSRKHGDAPGSKKLELLKNFPWSDVELFLRTYRGSEIVLDSASRLNLAKRLKMEGSQALRCLQESDLLQLVDALVSEKKWIKEFPAKNPRFSIHLPPAHNSRKLSYIYSSSSQKNGQLGVPSPTHKNPSEKPRSEILADCQQLLDELLQENPEGFNMGLFKKKFYDKFGYILDYQKLGYAKMVSLLQMMPGVKVECREVLPDRVVYAPGIRSLGSNKKLAGSDSDMSDSQLMDEDAESPWEELGPVSKSNLSKQDEDFGLSNKSSKYEPSVAEDDELSDTEDESSSCAKTEDQSRSKVNNEDSSLLQILNSWYSIKEEGNPKDHDSDVEGLVDCSNEDSRASGSSSNGIKDDASSKVNIAWTLQKLQKKYNFVSESSESKKDQLIDGILGTLKKSGDSRMQS*

Click here to download the sequence:
Link to NCBI Protein BLAST