Transcript Information: S_Transcript_172390.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value6.3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40630536236917
Replicate 21.0105094453824
Replicate 31.1262739593038
Condition 2: 8 Hour
Replicate 10.81394619531042
Replicate 20.17077747053226
Replicate 31.1390147575181
Condition 3: 24 Hour
Replicate 12.3345677012849
Replicate 21.5570557571536
Replicate 31.9253469011539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172390.p1 GENE.S_Transcript_172390~~S_Transcript_172390.p1 ORF type:3prime_partial len:131 (-),score=7.15,DUF825|PF05695.8|3.9e-75 S_Transcript_172390:3-392(-)
ATGCACCGATCAGATATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAATGGAATCTGATAAGTGAGATTTCGAGTAAGTGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCATTGATATGGACACATCTGGGATCGCCAAATGTTCGGGAGTTCTTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGGATATCTCGTTCATACACATCTTCTCTTTGTTTTCCGAGCCTCTAGTGAGTTACAGACAGAGTTCGAAAAGGTCAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCTACATCGGAACCGAATTCCTTCTGGTTAAAGAATCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172390.p1 GENE.S_Transcript_172390~~S_Transcript_172390.p1 ORF type:3prime_partial len:131 (-),score=7.15,DUF825|PF05695.8|3.9e-75 S_Transcript_172390:3-392(-)
MHRSDISWRILQKKLCLPQWNLISEISSKCLHNLLLSEEMIHRNNESPLIWTHLGSPNVREFFYSILFLLLVAGYLVHTHLLFVFRASSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSEPNSFWLKNL

Click here to download the sequence:
Link to NCBI Protein BLAST