Transcript Information: S_Transcript_172456.p2


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59404020614242
Replicate 20.78795676991124
Replicate 30.24700092969108
Condition 2: 8 Hour
Replicate 10.95202635344344
Replicate 21.0986175671294
Replicate 30.85644030555729
Condition 3: 24 Hour
Replicate 10.58513080778377
Replicate 20.2023554605031
Replicate 30.45039365009136


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172456.p2 GENE.S_Transcript_172456~~S_Transcript_172456.p2 ORF type:complete len:224 (-),score=26.40,DUF4283|PF14111.2|6.5e-21 S_Transcript_172456:498-1169(-)
ATGCAAGGGGATCATACGGACAGAAGCTGGAGGCCGTGTCATCAAGGGCCGATTATTACTATTAACCAACATGCAGTGCAAGAGAGTAGAGAATTTTGGTCCTTTTGTGTTCTTGGCTACTTAGTGGACTATAGACTGTTCTCAGAAAGGAGAATTCAAGAAACTGTGAACTCCAAATGGAGGACTAGAGATGATATTCTGGTTGCCAAGGTTGGAGATATCTATATTTTTCACTGTGTTGAGCCAAGAGAGAAGGAGGATCTCCTTCAGCAAGGTCTAGCAAATTGTGAAGGTGCACTGATGGTATTTAAGGACTGGGAACCAAACTTGATTCCCAGAGTTACTCGATTCCCTCATGCCAGGATTTGGGTGCATATCTGTGGGTTACCTTGGGAGTACCTTAACATGCATGTGGCTACAGAGGTGGGGAGACTTTTTGGAAGACCCTTTGAAGTGGATCCTTACTTTCAGTTACTTCCTCGTACAGAGGCGTTGCGCATCCGGGTTGAAGTTGAACTGGACAAGACTCTGGTGCCAGGGTTCTTTCTTAGTCTGGACAATGGTCAGTTCATTTGGATTCAATTCAGGTATGAGAATATTTCAAATACTGTACTCGTTGTGGTAAAGTTGGGCACGTTGTGTATTGTTGCACTGCTTCTTCGGATGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172456.p2 GENE.S_Transcript_172456~~S_Transcript_172456.p2 ORF type:complete len:224 (-),score=26.40,DUF4283|PF14111.2|6.5e-21 S_Transcript_172456:498-1169(-)
MQGDHTDRSWRPCHQGPIITINQHAVQESREFWSFCVLGYLVDYRLFSERRIQETVNSKWRTRDDILVAKVGDIYIFHCVEPREKEDLLQQGLANCEGALMVFKDWEPNLIPRVTRFPHARIWVHICGLPWEYLNMHVATEVGRLFGRPFEVDPYFQLLPRTEALRIRVEVELDKTLVPGFFLSLDNGQFIWIQFRYENISNTVLVVVKLGTLCIVALLLRMR*

Click here to download the sequence:
Link to NCBI Protein BLAST