Transcript Information: S_Transcript_17249.p1


Annotated TAIR IDAT4G33520.2
Annotated Gene NameP-type ATP-ase 1
Annotated Gene Symbol(s)PAA1, HMA6
Annotation TypeOrtholog
Chromosome Positionchr4:16118993-16125849 | Forward length=949
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.501141513027
Replicate 212.697103961875
Replicate 312.426515908181
Condition 2: 8 Hour
Replicate 117.406622010993
Replicate 217.94209513414
Replicate 316.791543768596
Condition 3: 24 Hour
Replicate 112.353872857216
Replicate 213.398122228183
Replicate 311.964303115247


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17249.p1 GENE.S_Transcript_17249~~S_Transcript_17249.p1 ORF type:complete len:702 (+),score=152.39,E1-E2_ATPase|PF00122.16|5.8e-53,Hydrolase|PF00702.22|9.4e-41,HAD|PF12710.3|2e-09 S_Transcript_17249:3702-5807(+)
ATGCTTGGTCACCTGTCACATTTCTTTGGAGCTAAGGCGTCATGGATACATGCATTTCACTCCACAGGATTCCATTTATCTCTGTCCTTATTCACATTACTCGGACCTGGGCGACAACTAATAGTTGATGGTCTATGGAGTCTTTTTAGGGGTTCCCCCAACATGAACACTTTGGTTGGACTTGGAGCTTTATCATCCTTTTCTGTTAGCTCTTTGGCTGCATTTATCCCGAAGCTGGGGTGGAAGGCATTTTTTGAGGAACCGATCATGTTGATAGCCTTTGTTTTGTTGGGAAGGAATCTTGAGCAAAGAGCTAAAATTAAGGCAACTAGTGATTTGACTAACCTTTTGAGTATTTTACCATCAAAAGCTCGTCTCTTAGTTACTGTTGCTGAAGATACTGTATCAACTGTTGAAGTTCCATGTAGCAATCTGACAGTTGGAGACAAAATTGTGGTGCTACCCGGGGACTGTATACCAGCTGATGGAATTGTCACAGCTGGCAGAAGCACAGTTGACGAATCAAGTTTTTCTGGGGAGCCTTTGCCAGTGACAAAGCTACCTGGGGCTGAGGTTTCAGCAGGGAGTATAAACCTGAATGGAACCCTTACTATTGACGTAAGAAGGCCTGGTGGTGAGACAACAATGGGTGACATTGTCCGACTAGTGGGGGAGGCACAAAGTCGGGAAGCTCCTGTTCAGCGTTTGGCTGACAAGGTGGCTGGGCACTTCACTTATGGTGTGATGGCATTGTCTGCTGCTACATTTATGTTCTGGAACTTATTTGGCTCTCGGATTATGCCTTCTGCCTTTCTGGGGACAAGTTCCGTTTCTCTAGCCCTTCAGCTTGCTTGTAGCGTTCTAGTTGTGGCGTGTCCATGTGCTCTTGGCTTAGCCACACCAACTGCTGTGCTGGTTGGAACTTCACTTGGTGCAAAGAGGGGATTACTTTTGCGTGGTGGAGATGTGTTGGAGAAATTTTCGATGGCTAATGCAGTCGTTTTTGACAAGACAGGCACTTTGACCATTGGAAAACCTGTTGTGACAAAAGTAGTCACTCTCGGTCATGAAACAGATCATTTGACAGATGTTGACTCAGACTATTTGTCAGAAGCCGAGGTATTAAAACTTGCAGCTAGTGTCGAGTCAAATACTATCCATCCAGTTGGGAAAGCTATAGTGGAAGCTGCTAGATCTGTTGGTGCCCTGAAGGTCAAAGCTGCTGATGGTTCCTTCTTGGAGGAGCCCGGATCTGGTGCTGTAGCAACCATTGGGACTAGAAGGGTTGCTGTTGGAACCTTGGAATGGCTTAGAAGGCACGGAGTCCAGGACAACCCGTTTCAAGAGTTGGAAGAACAAAGCAATCAGTCAGTTGTCTACATTGGAGTGGACGGAAATGTCGCTGGCCTTGTTTACATCGAGGATCAGATAAGAGATGATGCAAAAGAAGTTGTCCAATCTCTGTCCAGACAAGGGATAGAAGTGTACATGCTATCAGGAGATAAAAGAAATGCTGCCGAATATGTTGCCTCTATCGTAGGCATACCCAAGGACAAGGTCTTTTCTGGAGTAAAACCTGATCAAAAGAAGACATTCATAAGTGAACTCCAGAATAATAACATTGTCGCAATGGTTGGAGATGGGATCAACGATGCTGCTGCTCTGGCTTCATCACATGTTGGAGTTGCTATGGGTGGCGGTGTTGGAGCTGCCAGTGAGGTATCTTCGATTGTGCTGATGGGCAACCGACTTTCACAAGTACTCGATGCCCTAGAGCTCAGTAAATTGACCATGAAGACTATAAAGCAAAACCTCTGGTGGGCATTTGGTTACAACATCGTTGGACTCCCAATAGCTGCAGGAGTATTACTTCCATTTACTGGGATGATGCTGACTCCTTCAATTGCTGGAGCACTCATGGGTCTGAGTTCTATAGGGGTGATGTCAAATTCTTTGCTTCTGAGATTAAGATTTTCATCGAAGCAGACACGCCACTCTGAAACTTCGTTAAAAACTGAAGGCCAGTCACCCCTTGAAGTTGTAGTGGCTGAGAACGAAAAGTCAAAAGCCCCGTATTCGAGTTCTAGATTGAGAAATACGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17249.p1 GENE.S_Transcript_17249~~S_Transcript_17249.p1 ORF type:complete len:702 (+),score=152.39,E1-E2_ATPase|PF00122.16|5.8e-53,Hydrolase|PF00702.22|9.4e-41,HAD|PF12710.3|2e-09 S_Transcript_17249:3702-5807(+)
MLGHLSHFFGAKASWIHAFHSTGFHLSLSLFTLLGPGRQLIVDGLWSLFRGSPNMNTLVGLGALSSFSVSSLAAFIPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDLTNLLSILPSKARLLVTVAEDTVSTVEVPCSNLTVGDKIVVLPGDCIPADGIVTAGRSTVDESSFSGEPLPVTKLPGAEVSAGSINLNGTLTIDVRRPGGETTMGDIVRLVGEAQSREAPVQRLADKVAGHFTYGVMALSAATFMFWNLFGSRIMPSAFLGTSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGDVLEKFSMANAVVFDKTGTLTIGKPVVTKVVTLGHETDHLTDVDSDYLSEAEVLKLAASVESNTIHPVGKAIVEAARSVGALKVKAADGSFLEEPGSGAVATIGTRRVAVGTLEWLRRHGVQDNPFQELEEQSNQSVVYIGVDGNVAGLVYIEDQIRDDAKEVVQSLSRQGIEVYMLSGDKRNAAEYVASIVGIPKDKVFSGVKPDQKKTFISELQNNNIVAMVGDGINDAAALASSHVGVAMGGGVGAASEVSSIVLMGNRLSQVLDALELSKLTMKTIKQNLWWAFGYNIVGLPIAAGVLLPFTGMMLTPSIAGALMGLSSIGVMSNSLLLRLRFSSKQTRHSETSLKTEGQSPLEVVVAENEKSKAPYSSSRLRNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST