Transcript Information: S_Transcript_172494.p1


Annotated TAIR IDAT5G13500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4338676-4340827 | Forward length=358
E-Value3.9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5651085527885
Replicate 21.329083708284
Replicate 33.5552262329832
Condition 2: 8 Hour
Replicate 13.3401213749726
Replicate 25.121266556082
Replicate 32.8249918512626
Condition 3: 24 Hour
Replicate 12.6319136735656
Replicate 21.0922318831975
Replicate 30.60776010614738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172494.p1 GENE.S_Transcript_172494~~S_Transcript_172494.p1 ORF type:5prime_partial len:83 (+),score=21.63 S_Transcript_172494:3-251(+)
AGGATTCTGCATTCTGGGAGATCTGATGACTTGATGGACGAGATTCCCACTTATGTTGTTGACCCACTTCCAGCAGGTCTGGATCGGTTAGACAAGGGGAAACTTAACTTTCAGAGGAATGGAAGGTGGGCTGAAGTCAATAGATCTGTGGAGTTAGGAGAAGGGCAGAAGGGACTAGATTGTTGTTGCCAATATATTATCTTGCAAGCTGGTGCTGAAAAGGAGTTGCTTGAGTTTCTAAATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172494.p1 GENE.S_Transcript_172494~~S_Transcript_172494.p1 ORF type:5prime_partial len:83 (+),score=21.63 S_Transcript_172494:3-251(+)
RILHSGRSDDLMDEIPTYVVDPLPAGLDRLDKGKLNFQRNGRWAEVNRSVELGEGQKGLDCCCQYIILQAGAEKELLEFLNS*

Click here to download the sequence:
Link to NCBI Protein BLAST