Transcript Information: S_Transcript_172513.p1


Annotated TAIR IDAT2G33440.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14171619-14173226 | Forward length=322
E-Value4E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2948935710954
Replicate 22.9883317268104
Replicate 32.6574547670894
Condition 2: 8 Hour
Replicate 14.4248648496645
Replicate 25.4156636476572
Replicate 34.6686006281804
Condition 3: 24 Hour
Replicate 13.5883526194924
Replicate 23.3309924795208
Replicate 34.2157884020079


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172513.p1 GENE.S_Transcript_172513~~S_Transcript_172513.p1 ORF type:5prime_partial len:347 (-),score=102.29 S_Transcript_172513:219-1259(-)
CTGACGGTAGCTCAAGCTGTGCTGAACACATCTTATATGGAAAACTCTGGAAGTAGACAATTTTATGGAATTCCTGAGCATGTGAAACCCCTTCTTGAGATACCAACACCAGTCCTAAAGCTTAGTAATGTGCTGGATCAGGATGCCATGATGTTGCTCTCAGAGACAGAACTTGATGAAATTTTGGAAGATATAAGACTAGAATGTTGCAGGTTTGGCTCTGTTGTATCGATTAATGTTGTAAAGACTAGCAACATGGGCATTTCCATTTTAGAAACAAAAGAAGTTCTAGATGATTTGAAACCTAATCAACCTCAAGAAGAGGAGTCTCAGGAACACCATTTGAATGTGGAATCGGGGGGCGGTGTTGTGGGCCATGATGGTGGAGATGGTGTTGAAGTGGAACCTCCAAGCATTGTCAATGAACTTGATGCAGTAGACAGAGTCAAAGAAGGTGATACACATGATTTGGCTCCGGTAACTACTACCATGGGTGTTGAAGGAGCTACAGTGGCAACTAGAACCGAGGATTTCAAAGAAGCCGACAAAAATGTTCCTCAGAGGTGTGGTGGTGAATCTGCTGCCAATCACGCACAAGAGTTGGCTGTGACTGATTTTGCTGCTGAGGAGGATACGGGAAAGACAAATGATCATCAAGAAGTACCTGTCCAGAAGAGTGAACTGGAAAGTGAATTGCACCCTAGTGAAAATATGGATATTGAGAAATCAAGTAATGGTGAAACTCCAAGTGCTTCAGCTGTTCCAGAGTTTGATAAAAGCACTAGCAAACTACAGGAAGCTATTCCTGTAGCAAATGACAGTGCGCCAAGCAACCAAGGAGCCAAAGAAAATGGTGTGCAGAAAGAAAATGCTAATGATATCGAGGATGTATTCAAACTTGGTAGTGTTTTTGTGGAGTTCAGGAGGACTGAGGCTTCGTGTATGGCAGCACATTCTTTGCATAGACGTGTCTTTGACGATCATATTGTGACAGTCGAATATGTGCCACTCGATGCCTATCGAGCAAAGTTCCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172513.p1 GENE.S_Transcript_172513~~S_Transcript_172513.p1 ORF type:5prime_partial len:347 (-),score=102.29 S_Transcript_172513:219-1259(-)
LTVAQAVLNTSYMENSGSRQFYGIPEHVKPLLEIPTPVLKLSNVLDQDAMMLLSETELDEILEDIRLECCRFGSVVSINVVKTSNMGISILETKEVLDDLKPNQPQEEESQEHHLNVESGGGVVGHDGGDGVEVEPPSIVNELDAVDRVKEGDTHDLAPVTTTMGVEGATVATRTEDFKEADKNVPQRCGGESAANHAQELAVTDFAAEEDTGKTNDHQEVPVQKSELESELHPSENMDIEKSSNGETPSASAVPEFDKSTSKLQEAIPVANDSAPSNQGAKENGVQKENANDIEDVFKLGSVFVEFRRTEASCMAAHSLHRRVFDDHIVTVEYVPLDAYRAKFPK*

Click here to download the sequence:
Link to NCBI Protein BLAST