Transcript Information: S_Transcript_172643.p1


Annotated TAIR IDAT3G55120.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)TT5, A11, CFI
Annotation TypeHomolog
Chromosome Positionchr3:20430248-20431415 | Reverse length=246
E-Value8E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 20.8022832566369
Replicate 30.50298371137092
Condition 2: 8 Hour
Replicate 11.5509374776097
Replicate 20.305070663269
Replicate 34.5538401701551
Condition 3: 24 Hour
Replicate 11.3901289494014
Replicate 21.3392252295114
Replicate 31.1464565638689


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172643.p1 GENE.S_Transcript_172643~~S_Transcript_172643.p1 ORF type:complete len:220 (+),score=55.04,Chalcone|PF02431.11|1.9e-97 S_Transcript_172643:91-750(+)
ATGGCTGCATCACAGGAGGTGAGTTCAGTGCTGGTGGAGGAGTACGAGTTCCCTCCATGGGTGAAGGCACCGGGCTCCGACAAGCAGGACTTTCTCGGTGGTGCAGGGGTGAGAGGATTAGAGATAGAAGGGAAGTTTGTGAAGTTCACGGCCGTGGGGATATATTTGGAAGAGAGTGCTCTTCCTGTGTTGGCTGCTAAGTGGAAGGGCAAGAGTAGTCATGAGTTGGCTGATTCAGTTCACTTCTTTCGGGACATCGTCACAGGTCCATTTGAAAAATTAACCCAAGTGAGCATGATCTTGCCATTGTCGGGGCAACAATATTCTGAAAAGGTGGCAGAGAAATTTGTTGAAATGTGGAAACTCTTTGGCATTTACACTGATGACGAAGCCAAGGCAATTGAGAAGTTCCTTCAGGTCTTCAAGGACCAGAACTTCCCCCCAAGCAGTTCTATTCTGTATACACAATCACCCCTTGGTTCACTCACGATTGCATTTTCCAAGCATGATTCCATTCCTGAAGCAGGAAATGCAGTCATAGAGAACAAACACTTATCAGAATCTGTGTTGGAGTCTATGATTGGCAAACATGGTATTTCCCCTTCAACAAAGCAGAGTTTAGCTGCTAGACTTTCTGATTTATTGAACAACAGCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172643.p1 GENE.S_Transcript_172643~~S_Transcript_172643.p1 ORF type:complete len:220 (+),score=55.04,Chalcone|PF02431.11|1.9e-97 S_Transcript_172643:91-750(+)
MAASQEVSSVLVEEYEFPPWVKAPGSDKQDFLGGAGVRGLEIEGKFVKFTAVGIYLEESALPVLAAKWKGKSSHELADSVHFFRDIVTGPFEKLTQVSMILPLSGQQYSEKVAEKFVEMWKLFGIYTDDEAKAIEKFLQVFKDQNFPPSSSILYTQSPLGSLTIAFSKHDSIPEAGNAVIENKHLSESVLESMIGKHGISPSTKQSLAARLSDLLNNSN*

Click here to download the sequence:
Link to NCBI Protein BLAST