Transcript Information: S_Transcript_172761.p1


Annotated TAIR IDAT3G04090.1
Annotated Gene Namesmall and basic intrinsic protein 1A
Annotated Gene Symbol(s)SIP1;1, SIP1A
Annotation TypeOrtholog
Chromosome Positionchr3:1072340-1074031 | Reverse length=240
E-Value6.5E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.548988854397
Replicate 220.990913141765
Replicate 320.832078410221
Condition 2: 8 Hour
Replicate 127.369023200531
Replicate 230.432960092907
Replicate 333.052508634445
Condition 3: 24 Hour
Replicate 119.899185365926
Replicate 220.186390877718
Replicate 322.873432982777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172761.p1 GENE.S_Transcript_172761~~S_Transcript_172761.p1 ORF type:complete len:247 (+),score=55.00,MIP|PF00230.16|3e-17 S_Transcript_172761:117-857(+)
ATGGCAATAGGAGGGGCAATAAAGGCAGCCCTTGGGGATGGAATTCTGACCTTTATGTGGGTATTTTGTGCTTCAACAATTGGGATTCTAACATCCCTGATTGCTGGTTATACTGGGATTCAAGGCCCCTTGACACTTGTTATCACCACTTCAATTGTGGCTTTCCTTGTTTTTGTATTTACATTTGTAGGGCAAATTCTTGGTGGTGCTAGTTTCAACCCCATTGGCACTGCTGCCTTCTATGCTGCTGGTATTGGCCGTGATTCCCTTCTTTCTATGGCCCTCCGCTTCCCTGCTCAGGCTGCTGGTGCTGTTGGCGGTGCTATAGCTATTTCAGAAGTGATGCCAAGTCAGTATAAGCACATGTTGAAGGGACCTTCAATTAAAGTGGACTTGCATACTGCAGCCATGGCCGAAGGTGTATTGACCTTTCTTATCAGCATGGCTGTCCTCACCATTATTCTCAGGATTCCAGGTGGCTTGATTGTAAAGACATGGTTGCTTGCCATGGCTACAGTTACTTTGGTCGTTTTTGGTGGCAGTTATACTGGACCTGCCATGAACCCTGCTAACGCGTTTGGATGGGCGTACATAAACAATCAGCATGATACATGGGATCAGTTCTATGTTTATTGGATCTGTCCCTTCATTGGTGCCATCATGGCTGCTTGGGTGTTCAGATTCATCTTTCCACAGCCTAAAAAGCAGAAGAAAGCTCCAAAGAACAAGAAAGCAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172761.p1 GENE.S_Transcript_172761~~S_Transcript_172761.p1 ORF type:complete len:247 (+),score=55.00,MIP|PF00230.16|3e-17 S_Transcript_172761:117-857(+)
MAIGGAIKAALGDGILTFMWVFCASTIGILTSLIAGYTGIQGPLTLVITTSIVAFLVFVFTFVGQILGGASFNPIGTAAFYAAGIGRDSLLSMALRFPAQAAGAVGGAIAISEVMPSQYKHMLKGPSIKVDLHTAAMAEGVLTFLISMAVLTIILRIPGGLIVKTWLLAMATVTLVVFGGSYTGPAMNPANAFGWAYINNQHDTWDQFYVYWICPFIGAIMAAWVFRFIFPQPKKQKKAPKNKKAD*

Click here to download the sequence:
Link to NCBI Protein BLAST