Transcript Information: S_Transcript_17283.p1


Annotated TAIR IDAT3G55580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20612766-20615730 | Forward length=488
E-Value1.3E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.843075263725
Replicate 235.218964860941
Replicate 333.333177354265
Condition 2: 8 Hour
Replicate 10.56267520625681
Replicate 20.64931486817148
Replicate 30.73115044555345
Condition 3: 24 Hour
Replicate 174.929679519188
Replicate 262.908521842526
Replicate 354.037731020988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17283.p1 GENE.S_Transcript_17283~~S_Transcript_17283.p1 ORF type:complete len:379 (+),score=81.92,RCC1_2|PF13540.2|3.9e+03,RCC1_2|PF13540.2|0.011,RCC1_2|PF13540.2|0.00027,RCC1_2|PF13540.2|9.9e-06,RCC1_2|PF13540.2|7.4e-06,RCC1|PF00415.14|1.1e+04,RCC1|PF00415.14|3.9e+03,RCC1|PF00415.14|3,RCC1|PF00415.14|15,RCC1|PF00415.14|0.012,RCC1|PF00415.14|7.3e-07,RCC1|PF00415.14|1.7e+02 S_Transcript_17283:308-1444(+)
ATGAATGGGGAGGAGAGAGAAGTGAAAATGGAGGAAGACAGAGAAAAGTTGGTGTATATGTGGGGATACTTGCCTGGAGCTTTGCCTCAAAGAACGCCTTTACAATCGCCGTTACTTGTCAAGCTTCCTCCGTCTATTGGCTCTTGGAAAGACGTTTGTGGTGGGGGTTGTGGCTTCGCTATGGCCCTCTCTGATACTGGAAAGCTAATCACATGGGGTTCAACTGATGATTTAGGGCAGAGCTATGTGACTTCTGGCAAACATGGGGAAACACCAGAGCCTTTTCCTCTTCCTACAGAAGCTTCCATTGTAAGAGCAGCTGCTGGGTGGGCCCATTGTGTCTCAGTTACAGATAGAGGAGAAGTTTACACATGGGGTTGGAAGGAGTGTGTTCCATCGGGGAAGGTTTTTGGAGACTCCCCAACTGGGGGAAGCATGGAGAAGGATATGCTTGACAGACAGAGTCCATCCACAGAGCAAGTGAGCCCTCGCTCCCAAGGGTCCAAAAATGCTAGTGGGTCAGGAACTGCTGTAGAAGAAACTGCAAAACGGAGAAGGGTATCATCAGCCAAACAAACTGCAGATGCTTCCACAGCCAGTGAGGAAACTCTTTCTGCATTGCCCTGTCTAGTGACGCTTAGCCCAGGAGTAAGGATATCAACTGTAGCAGCCGGGGGACGGCATTCTTTAGCATTGTCAGATGTAGGACAAGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGTTGGGTCTGGGCTCAAGAATACGCATGGTGTCTTCTCCACATCCAGTACCATGTATCGAGTCATCCTATAGGAAAGATAGGCTTTCGGGATTTCCTCAAGGAAGCTTAACTGCAGATGGCCATGGATATAGGGTTCCCGGGACTTACATCAAGGGTATTGCCTGTGGAGGGAGGCACAGTGCTGTAATCACAGATGCTGGAGCAATACTTGCTTTTGGTTGGGGCCTCTATGGACAGGTATGGGATTACCCCCCGTTTTTTTCATCTCTGTTTGCTTCTTGGAATTATTTGTGGCATATGTTGCACGGTTCCTGCTTCTTGGCTATATTTCACGATATGATGTTTTACAAGTTGTCATTGAAAGAATTAGGCAAGTCGAGGTCAATTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17283.p1 GENE.S_Transcript_17283~~S_Transcript_17283.p1 ORF type:complete len:379 (+),score=81.92,RCC1_2|PF13540.2|3.9e+03,RCC1_2|PF13540.2|0.011,RCC1_2|PF13540.2|0.00027,RCC1_2|PF13540.2|9.9e-06,RCC1_2|PF13540.2|7.4e-06,RCC1|PF00415.14|1.1e+04,RCC1|PF00415.14|3.9e+03,RCC1|PF00415.14|3,RCC1|PF00415.14|15,RCC1|PF00415.14|0.012,RCC1|PF00415.14|7.3e-07,RCC1|PF00415.14|1.7e+02 S_Transcript_17283:308-1444(+)
MNGEEREVKMEEDREKLVYMWGYLPGALPQRTPLQSPLLVKLPPSIGSWKDVCGGGCGFAMALSDTGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVRAAAGWAHCVSVTDRGEVYTWGWKECVPSGKVFGDSPTGGSMEKDMLDRQSPSTEQVSPRSQGSKNASGSGTAVEETAKRRRVSSAKQTADASTASEETLSALPCLVTLSPGVRISTVAAGGRHSLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCIESSYRKDRLSGFPQGSLTADGHGYRVPGTYIKGIACGGRHSAVITDAGAILAFGWGLYGQVWDYPPFFSSLFASWNYLWHMLHGSCFLAIFHDMMFYKLSLKELGKSRSIG*

Click here to download the sequence:
Link to NCBI Protein BLAST