Transcript Information: S_Transcript_172902.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53226002470361
Replicate 20.22062789557515
Replicate 30
Condition 2: 8 Hour
Replicate 10.21325390317133
Replicate 20.22371848639727
Replicate 30.21315847604981
Condition 3: 24 Hour
Replicate 10.10922441745297
Replicate 20.22663811576347
Replicate 30.25222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172902.p1 GENE.S_Transcript_172902~~S_Transcript_172902.p1 ORF type:complete len:200 (+),score=30.29,RVT_3|PF13456.2|3.8e-19 S_Transcript_172902:94-693(+)
ATGGATGACTTACAAAGTGCTCTGCGTTCTGAAGACATGGAATTACAAGGCACTACACCTCCGAGGACACTCTCCCTAATCCAATGGACTCCCCCAAGAGATGGTTGGTTTAAACTAAACTGTGATGGAGCTGCAAGAGGCAACCCTGGCCAGACTGGGGGAGGAGGCGTGCTGCGTGATTCAAGGGGAAGATTTATCAAGGCCTTCTCTTCTAACTTTGGGATATGTTCTTCTTTTCGTGCTGAGTTGCTAGCCCTGCATAAGGGAATACTACTAGCATGGGGAGAAGGGGTGCGCAATCTAGAAGTCGACCTGGACTCAATGGCAGTAGTAAACACAATGAAAGGTCACCCACCTCAACACCATCCACATTTTAATCTAATCATGCAATGCAGGAGGCTGCTAGAAGTGGAAGACTGGGATGTATTCATATCTCATTGCTACAGGGAGGCTAACATGGTGGCTGATAAACTTGCTAATATGGGAGTTGACCAAAGCGTTTCCTTGGTACTTCATGACTCACCTCCAGCAGACTTGGGAAACTTGCTCAATCAGGATATACAAGGTGTCTCTAGGCCTAGGTCAATCATTAATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172902.p1 GENE.S_Transcript_172902~~S_Transcript_172902.p1 ORF type:complete len:200 (+),score=30.29,RVT_3|PF13456.2|3.8e-19 S_Transcript_172902:94-693(+)
MDDLQSALRSEDMELQGTTPPRTLSLIQWTPPRDGWFKLNCDGAARGNPGQTGGGGVLRDSRGRFIKAFSSNFGICSSFRAELLALHKGILLAWGEGVRNLEVDLDSMAVVNTMKGHPPQHHPHFNLIMQCRRLLEVEDWDVFISHCYREANMVADKLANMGVDQSVSLVLHDSPPADLGNLLNQDIQGVSRPRSIINQ*

Click here to download the sequence:
Link to NCBI Protein BLAST