Transcript Information: S_Transcript_172903.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9140002744846
Replicate 23.3545761900315
Replicate 34.6376470853499
Condition 2: 8 Hour
Replicate 15.6119448202982
Replicate 28.2422600251624
Replicate 33.9889305459614
Condition 3: 24 Hour
Replicate 14.9821664101355
Replicate 24.5062549333088
Replicate 35.45740142099


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172903.p1 GENE.S_Transcript_172903~~S_Transcript_172903.p1 ORF type:internal len:171 (+),score=15.50,SEO_C|PF14577.2|1.1e-31 S_Transcript_172903:2-511(+)
ACAGAAGTAGATGTCAGCCTGCTTTTCGACTTCGTCCAGCATGTTTTCCGACTTCCTATAGGAGGACAAAAGGATAGGGAGACCGCGAGTCGGAATGCAAAGAGAATGCTCGAATGTTTACATAAGATGGGACAAGGGAAATACATTTGCTTGTATGGAGGTGAAGACATGGATTGGATTCGTAAATTTACAGCAAACGCCAAGAAAGTTGCTACCTTTGCAACGATAGAGCTGGAGCTAGTTTATGTTGGGAAGAGCTTGAAAACCAGAGAGACCATAGAAAAGGAGAAACTCAGCCACTCATGGCTTGACTTCACTTGGAGCTGGTATTTCTGGACTAGGCTCGAGTGCTTGTTATACTCAAGAATGCAATATTTATCAGAAAACAATAATGAAGATCAGAGCTGTGACTATGAGTATGTTTGGCCTAATTTCTTTCAAAAACAGTTTTTATTTCTCATTTTCCTCCTCTCCCTTCTCCTCTTTCACATTCCCTTTTTCTTCCCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172903.p1 GENE.S_Transcript_172903~~S_Transcript_172903.p1 ORF type:internal len:171 (+),score=15.50,SEO_C|PF14577.2|1.1e-31 S_Transcript_172903:2-511(+)
TEVDVSLLFDFVQHVFRLPIGGQKDRETASRNAKRMLECLHKMGQGKYICLYGGEDMDWIRKFTANAKKVATFATIELELVYVGKSLKTRETIEKEKLSHSWLDFTWSWYFWTRLECLLYSRMQYLSENNNEDQSCDYEYVWPNFFQKQFLFLIFLLSLLLFHIPFFFPT

Click here to download the sequence:
Link to NCBI Protein BLAST