Transcript Information: S_Transcript_17295.p1


Annotated TAIR IDAT3G55580.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20612766-20615730 | Forward length=488
E-Value4.5E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1138.96029125965
Replicate 2144.05977569728
Replicate 3130.18859691082
Condition 2: 8 Hour
Replicate 13.6892025443142
Replicate 22.3598996455408
Replicate 31.7088654198086
Condition 3: 24 Hour
Replicate 1219.23230119147
Replicate 2228.16816211462
Replicate 3208.10847187428


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17295.p1 GENE.S_Transcript_17295~~S_Transcript_17295.p1 ORF type:complete len:474 (+),score=113.78,RCC1|PF00415.14|1.4e+04,RCC1|PF00415.14|5.5e+03,RCC1|PF00415.14|4.1,RCC1|PF00415.14|19,RCC1|PF00415.14|0.015,RCC1|PF00415.14|9.1e-07,RCC1|PF00415.14|8.9e-11,RCC1|PF00415.14|2.7e-11,RCC1|PF00415.14|1.6e-12,RCC1_2|PF13540.2|5e+03,RCC1_2|PF13540.2|0.015,RCC1_2|PF13540.2|0.00035,RCC1_2|PF13540.2|1.3e-05,RCC1_2|PF13540.2|1.6e-05,RCC1_2|PF13540.2|3.9e-06,RCC1_2|PF13540.2|2.9e-10,RCC1_2|PF13540.2|9 S_Transcript_17295:308-1729(+)
ATGAATGGGGAGGAGAGAGAAGTGAAAATGGAGGAAGACAGAGAAAAGTTGGTGTATATGTGGGGATACTTGCCTGGAGCTTTGCCTCAAAGAACGCCTTTACAATCGCCGTTACTTGTCAAGCTTCCTCCGTCTATTGGCTCTTGGAAAGACGTTTGTGGTGGGGGTTGTGGCTTCGCTATGGCCCTCTCTGATACTGGAAAGCTAATCACATGGGGTTCAACTGATGATTTAGGGCAGAGCTATGTGACTTCTGGCAAACATGGGGAAACACCAGAGCCTTTTCCTCTTCCTACAGAAGCTTCCATTGTAAGAGCAGCTGCTGGGTGGGCCCATTGTGTCTCAGTTACAGATAGAGGAGAAGTTTACACATGGGGTTGGAAGGAGTGTGTTCCATCGGGGAAGGTTTTTGGAGACTCCCCAACTGGGGGAAGCATGGAGAAGGATATGCTTGACAGACAGAGTCCATCCACAGAGCAAGTGAGCCCTCGCTCCCAAGGGTCCAAAAATGCTAGTGGGTCAGGAACTGCTGTAGAAGAAACTGCAAAACGGAGAAGGGTATCATCAGCCAAACAAACTGCAGATGCTTCCACAGCCAGTGAGGAAACTCTTTCTGCATTGCCCTGTCTAGTGACGCTTAGCCCAGGAGTAAGGATATCAACTGTAGCAGCCGGGGGACGGCATTCTTTAGCATTGTCAGATGTAGGACAAGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGTTGGGTCTGGGCTCAAGAATACGCATGGTGTCTTCTCCACATCCAGTACCATGTATCGAGTCATCCTATAGGAAAGATAGGCTTTCGGGATTTCCTCAAGGAAGCTTAACTGCAGATGGCCATGGATATAGGGTTCCCGGGACTTACATCAAGGGTATTGCCTGTGGAGGGAGGCACAGTGCTGTAATCACAGATGCTGGAGCAATACTTGCTTTTGGTTGGGGCCTCTATGGACAGTGTGGGCAAGGGAGCACAGATGATGTATTAAGCCCTACTTGCGTATCGGCCTTGCTTGGTGTTAGAATTGAGGCTGTTGCGGCAGGACTGTGGCATACTGTCTGCATTTCTGCTGATGGTGGTGTATACGCATTTGGAGGGAATCAGTTTGGCCAGCTGGGAACCGGTTCTGATCAAGCTCAGACTCTTCCCAGGCTATTGGATGCACCAAGCATAGAGAATATCAATGCAAAGATAGTGTCTTGTGGTGCTCGTCATAGTGCTATTGTCACAGAGGATGGAGAAATATTCTGCTGGGGATGGAACAAGTATGGACAGCTTGGTTTGGGTGATGTGATTGATCGTAATATTCCTTCTCAAGTGAAGATTGACGGTTGTGTGGCACGAAACATTGCCTGTGGCTGGTGGCATACACTACTCCTAGCCGAGTCTCCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17295.p1 GENE.S_Transcript_17295~~S_Transcript_17295.p1 ORF type:complete len:474 (+),score=113.78,RCC1|PF00415.14|1.4e+04,RCC1|PF00415.14|5.5e+03,RCC1|PF00415.14|4.1,RCC1|PF00415.14|19,RCC1|PF00415.14|0.015,RCC1|PF00415.14|9.1e-07,RCC1|PF00415.14|8.9e-11,RCC1|PF00415.14|2.7e-11,RCC1|PF00415.14|1.6e-12,RCC1_2|PF13540.2|5e+03,RCC1_2|PF13540.2|0.015,RCC1_2|PF13540.2|0.00035,RCC1_2|PF13540.2|1.3e-05,RCC1_2|PF13540.2|1.6e-05,RCC1_2|PF13540.2|3.9e-06,RCC1_2|PF13540.2|2.9e-10,RCC1_2|PF13540.2|9 S_Transcript_17295:308-1729(+)
MNGEEREVKMEEDREKLVYMWGYLPGALPQRTPLQSPLLVKLPPSIGSWKDVCGGGCGFAMALSDTGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVRAAAGWAHCVSVTDRGEVYTWGWKECVPSGKVFGDSPTGGSMEKDMLDRQSPSTEQVSPRSQGSKNASGSGTAVEETAKRRRVSSAKQTADASTASEETLSALPCLVTLSPGVRISTVAAGGRHSLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCIESSYRKDRLSGFPQGSLTADGHGYRVPGTYIKGIACGGRHSAVITDAGAILAFGWGLYGQCGQGSTDDVLSPTCVSALLGVRIEAVAAGLWHTVCISADGGVYAFGGNQFGQLGTGSDQAQTLPRLLDAPSIENINAKIVSCGARHSAIVTEDGEIFCWGWNKYGQLGLGDVIDRNIPSQVKIDGCVARNIACGWWHTLLLAESPT*

Click here to download the sequence:
Link to NCBI Protein BLAST