Transcript Information: S_Transcript_172975.p1


Annotated TAIR IDAT3G01410.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:153650-155439 | Reverse length=294
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20
Replicate 30.039919342172296
Condition 2: 8 Hour
Replicate 10.87701821650547
Replicate 21.4042935293335
Replicate 31.6609751380505
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 32.456692636862


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172975.p1 GENE.S_Transcript_172975~~S_Transcript_172975.p1 ORF type:5prime_partial len:462 (+),score=71.54,RVT_3|PF13456.2|2.8e-13,RVT_3|PF13456.2|1.9e-10 S_Transcript_172975:2-1387(+)
GGGATAACAAGGCACACAAACATAAATCTCAAGAGAACAAAGAGAAAAAAGAGAGGGAAAAAAAAAAGCTTAGTGAAATTAATCATGTCTTTTCTGCTAGGTGGTAGTTCATATGGGAAATCCTACACCCTGAATGTCGACGGATCATACAGCAACCAGTTTCCCAAAGCAGGGGCTGGATGTTTGATCCGAGACAATGAAGGAGAGCTGATTGTTGCGGCTTCTTACAATCTTATTGCTGATATTGATCCTGCTAATTGGGACGTTGCTATAGTAGAAGCACTGGCTTTCAAAAACGGCTTAAATCTAGCTAAGCGCAACAACATCAAGCTCAATCTCATCAAAGGCGACAATAAGGAGGTCATTGATCATATCCAAAGTCGCACTTGGGGGGTGCCTAGAGCGCCCTTGAGTGCAATCATCAAGGAGATCAAGGCCCTTTTAAATGAGCAGAAGATCAATCCCAACTCCCAGATCGAGAAAATCGAAAGAGAAGCAAATGAAGCTGCTGATAAATTAGCTTCCTTAGGGTCAAAGCTAATTAGTAGTGGTAGTTGCAAAATTTATAAAAGTGAAGATGAACTTCCTTATCCGGTAGCTGAGATTATTAGGAGAGAAAAAACATCGTTAAGCAGTGGGGGTGACTTGGCATCAGCCATAGGAATGTTTGGAGCAGCGGTTGCTGGAGTAGCGATGGTCGGGTGGGGTGTGTCTAAGCTCTTGAGTGGTGATGACTTCAACGATCAACGACAAAACAAGGCTAAATCACCACTAGAATCAACATTGGACTTGTTAAATGGGGGTACTAGTATCAATACTGAAACCAAGGTAAATTATGATTATTTCCCTAATGAATCCCGAAAAAAAGTACAAGAATTTTACACCCTTAATGTTGATGGGATGGATAGTAACCAGTGGGAAGAAGGCGCGGCAGGGTGTATTATAAGAGACAAGCAGGGGGAACTTTTAGTGGCCGCGTCTTACAATCTTAGTAAGTGTTATCCTGGTGGTCATATTGGCATTGCGGAAGCAATGGCCTTGAAGAAGGGTCTGGAGTTGTCTAGAGATTACGGCCTTAAGCTCAATGTTGTTAGAGGTGACAACGAAGAGGTGATCAATCGTGTCCTGGGTTTTGAAAGGAGGCCACCTAAGAATCGTAAATTGAGTGTGATTGTGCAACAAATTAAAGCTCTTCTTTTGGAGCAGTCCATCGATCCCAAGACCCAGCTCAAGATTGTACCTAGTGAAGCTAACAAGGTTGCTGATAAATTAGCCTCGCTCGGACGTGGAATCTTCCAAGAGCAGATTTATACAAGGGGAGATTTTGGCCTTCCTCGTGATGTAGCCTACCTGATTCAACAGGATCAGGAAGATGGGAATTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172975.p1 GENE.S_Transcript_172975~~S_Transcript_172975.p1 ORF type:5prime_partial len:462 (+),score=71.54,RVT_3|PF13456.2|2.8e-13,RVT_3|PF13456.2|1.9e-10 S_Transcript_172975:2-1387(+)
GITRHTNINLKRTKRKKRGKKKSLVKLIMSFLLGGSSYGKSYTLNVDGSYSNQFPKAGAGCLIRDNEGELIVAASYNLIADIDPANWDVAIVEALAFKNGLNLAKRNNIKLNLIKGDNKEVIDHIQSRTWGVPRAPLSAIIKEIKALLNEQKINPNSQIEKIEREANEAADKLASLGSKLISSGSCKIYKSEDELPYPVAEIIRREKTSLSSGGDLASAIGMFGAAVAGVAMVGWGVSKLLSGDDFNDQRQNKAKSPLESTLDLLNGGTSINTETKVNYDYFPNESRKKVQEFYTLNVDGMDSNQWEEGAAGCIIRDKQGELLVAASYNLSKCYPGGHIGIAEAMALKKGLELSRDYGLKLNVVRGDNEEVINRVLGFERRPPKNRKLSVIVQQIKALLLEQSIDPKTQLKIVPSEANKVADKLASLGRGIFQEQIYTRGDFGLPRDVAYLIQQDQEDGNF*

Click here to download the sequence:
Link to NCBI Protein BLAST