Transcript Information: S_Transcript_172980.p1


Annotated TAIR IDAT3G01410.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:153650-155439 | Reverse length=294
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.235894146684
Replicate 25.9615389797442
Replicate 34.8555933337886
Condition 2: 8 Hour
Replicate 114.578095921181
Replicate 214.001780557427
Replicate 318.411378762732
Condition 3: 24 Hour
Replicate 18.2738126846592
Replicate 26.8567189757541
Replicate 36.0579506192427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_172980.p1 GENE.S_Transcript_172980~~S_Transcript_172980.p1 ORF type:5prime_partial len:433 (+),score=73.02,RVT_3|PF13456.2|4e-13,RVT_3|PF13456.2|4.7e-10,RNase_H|PF00075.20|0.041,RNase_H|PF00075.20|0.78 S_Transcript_172980:2-1300(+)
GGGATAACAAGGCACACAAACATAAATCTCAAGAGAACAAAGAGAAAAAAGAGAGGGAAAAAAAAAAGCTTAGTGAAATTAATCATGTCTTTTCTGCTAGGTGGTAGTTCATATGGGAAATCCTACACCCTGAATGTCGACGGATCATACAGCAACCAGTTTCCCAAAGCAGGGGCTGGATGTTTGATCCGAGACAATGAAGGAGAGCTGATTGTTGCGGCTTCTTACAATCTTATTGCTGATATTGATCCTGCTAATTGGGACGTTGCTATAGTAGAAGCACTGGCTTTCAAAAACGGCTTAAATCTAGCTAAGCGCAACAACATCAAGCTCAATCTCATCAAAGGCGACAATAAGGAGGTCATTGATCATATCCAAAGTCGCACTTGGGGGGTGCCTAGAGCGCCCTTGAGTGCAATCATCAAGGAGATCAAGGCCCTTTTAAATGAGCAGAAGATCAATCCCAACTCCCAGATCGAGAAAATCGAAAGAGAAGCAAATGAAGCTGCTGATAAATTAGCTTCCTTAGGAGCAAAGCTAATTAGTGGTAGTAGTTTCAAAATTTATAAAAGCGAAGATGAACTTCCTTATTCGGTAGCTGAGATTATTAGGAGAGAAAAATCATCGTCGAGCAGTGGTGGTGACTTGGCCTCATCCATAGGGATGTTTGGAGCAGCGGTTGCTGGAGCAGCGATGATCGGGTGGGGTGTTTCTAAGCTCTTAAGTGGTGATGACTTCAACGACCAACGACAAAACAAGGCTAAATCAACATGGGACTTGCAACAAGAATTTTACACCCTTAATGTTGATGGGATGGATAGTAACCAGTGGGAAGAAGGCGCGGCAGGGTGTATTATAAGAGACAAGCAGGGGGAACTTTTAGTGGCCGCGTCTTACAATCTTAGTAAGTGTTATCCTGGTGGTCATATTGGCATTGCGGAAGCAATGGCCTTGAAGAAGGGTCTGGAGTTGTCTAGAGATTACGGCCTTAAGCTCAATGTTGTTAGAGGTGACAACGAAGAGGTGATCAATCGTGTCCTGGGTTTTGAAAGGAGGCCACCTAAGAATCCTCGATTGAGTGAGATTGTGCAAGAAATTAAAGCTCTTCTTTTAAAGCTATCCATCGATCCCAAGACCCAGCTCAAGATTGTACCTAGTGAAGCTAACAAGGTTGCTGATAGATTAGCCTTGCACGGACGTAGAATCCGCCAAGAGAAGATTTATACAAGCGGAGATGTTGGCCTTCCTCGTGATGTAGCCTACCTGATTCAACAGGATCAGGAAGATGGGAATTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_172980.p1 GENE.S_Transcript_172980~~S_Transcript_172980.p1 ORF type:5prime_partial len:433 (+),score=73.02,RVT_3|PF13456.2|4e-13,RVT_3|PF13456.2|4.7e-10,RNase_H|PF00075.20|0.041,RNase_H|PF00075.20|0.78 S_Transcript_172980:2-1300(+)
GITRHTNINLKRTKRKKRGKKKSLVKLIMSFLLGGSSYGKSYTLNVDGSYSNQFPKAGAGCLIRDNEGELIVAASYNLIADIDPANWDVAIVEALAFKNGLNLAKRNNIKLNLIKGDNKEVIDHIQSRTWGVPRAPLSAIIKEIKALLNEQKINPNSQIEKIEREANEAADKLASLGAKLISGSSFKIYKSEDELPYSVAEIIRREKSSSSSGGDLASSIGMFGAAVAGAAMIGWGVSKLLSGDDFNDQRQNKAKSTWDLQQEFYTLNVDGMDSNQWEEGAAGCIIRDKQGELLVAASYNLSKCYPGGHIGIAEAMALKKGLELSRDYGLKLNVVRGDNEEVINRVLGFERRPPKNPRLSEIVQEIKALLLKLSIDPKTQLKIVPSEANKVADRLALHGRRIRQEKIYTSGDVGLPRDVAYLIQQDQEDGNF*

Click here to download the sequence:
Link to NCBI Protein BLAST