Transcript Information: S_Transcript_173000.p1


Annotated TAIR IDAT3G27120.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10000248-10003265 | Reverse length=476
E-Value9.7E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5990644518993
Replicate 21.6728581495684
Replicate 31.1873006062404
Condition 2: 8 Hour
Replicate 12.105081447614
Replicate 22.5924459797108
Replicate 32.6225506352338
Condition 3: 24 Hour
Replicate 10.62503243177666
Replicate 20.90784939075497
Replicate 31.659819803484


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173000.p1 GENE.S_Transcript_173000~~S_Transcript_173000.p1 ORF type:complete len:699 (+),score=139.29,AAA|PF00004.25|1.8e-38,Vps4_C|PF09336.6|3.7e-08 S_Transcript_173000:50-2098(+)
ATGGCGAAACAACAGGAGAGAGAAAGAGAAGAACAACAACCACAACAAAATTGGAGAAAGGACGTCGATCAGAACATCAAACGCCTACAATCTCTGCAATTCGGTGCAGATTCAGCCATTGAGAATCGCGATTTCCGTTCCTCGGAAGTTCTTAGTCTTCGTCTCATCGGTTTCCTCGATTCTCGCTCTCAAAACGACGTCGATGAGGCCTTCGTTCAACCTATTCGTCGCGATGCTTTGTCTAAACTTGATTCCTCTCGCCGTGCCCTCGCTCCTGATTCCGACCGGCAAGCGTTTGAGGCGGCAGGCAGAGATCCTGAAAAAGTTTTCTCCATGGACGTAGATATTGACAGGATTAAACAGTCAAAGTATTTTCGTGCACTTCTTCAGCAGTATAAGAAGGAGAATGTGGGTGGATTGGCTGGCCAAGAGGATGGGCTGGGCAAAATGACCAGGAAAACCTTCAAACCTACCAGTGATACAGATTTGTCATCCTGGCATGGGAACAATATGAAGGGCAGGAATAATATCCTTGAAAAAGGATCACCCTTGTCCAAAAATATTGGTCTTGGTGACTGTACCATTTTGGGGAAGACACGCGCAGGAAACAATCATATGAAAGGCCATATCATCTCTACACATTCTGAAGAAGAAAGAATACTGGGAAATAATCAAGGAGTAAAGCGTCAGTACATGGAAACAAGGAGTCCCAGAAATTATTGTGCCAATTCACCTTTGAACAGTGAAGAAACCAATGGAGAAGTTTCTGGAAATGGATTTGTTACTGCGAGAGCAAAATTGGAAATGGATGCAAAGCAAAAGCGAGGTTTTGGGGGTCCATCAAGTGCTTCTGTCTCCCCCCTCAGTGATTACAACTCCAACAGCAGGGCTTATGGTGGGAAATCATATGGTCTATCACGCCATGGGGTCCGTGGCAACTTTGTTCCTCCAATTAGATCCAATGGCAGCAACACAGGGAATTTGACATCACGAATTGGAGGCAAATGTGATGATGCTATGGATGATTCAATCAAGAGATGTTTGGATGTGCTATGTGGTCCTGATGGAGAGCTTCCTGAGAAGCTAAGAAATTTGGAGCCTCGTCTTATTGAACATGTTAGCAATGAAATCATGGATCGAGATCCCAATGTTCGTTGGGATGACATTGCTGGTTTGGAACATGCGAAGAAATGTGTCACGGAGATGGTAGTATGGCCTCTTTTGCGCCCTGACATCTTCAAAGGATGTCGCGCTCCAGGAAGAGGTCTTCTCTTGTTTGGTCCGCCTGGAACTGGTAAAACGATGATAGGGAAAGCTATAGCCGGAGAAGCTAAGGCGACATTTTTCTACATATCTGCCAGTTCATTGACTAGCAAATGGATTGGTGAGGGTGAAAAGCTAGTGAGGGCCCTTTTTGGAGTAGCCAGCTGCCGTCAACCAGCTGTGATTTTTGTTGATGAAATTGATTCCCTTCTCTCTCAGCGCAAATCAGAAGGGGAGCATGAAGCAAGTAGGAGACTGAAGACACAATTCCTTATTGAGATGGAAGGATTCAACTCTGGAAGCGAGCAGATACTACTAATAGGAGCCACAAATAGGCCCCAGGAACTTGATGAAGCAGCAAGGAGACGACTTACAAAGCGGTTATATATCCCCCTCCCTTCACCAGAGGCAAGAGCGTGGATTGTCCGTAATCTCTTGGAGAAAGATGGACTGTTTAAGCTCTTGAAGGAGGATATGGACATAATCTGCAAGTTGACCGAAGGATACTCAGGTTCGGACATGAAAAATCTAGTGAAGGATGCTTCCATGGGCCCACTTAGGGATGCTCTGAGGCAGGGCATTGAAATCACAAAGCTAAACAAGGAGGATATGAGACCAGTAACTGTCCAGGATTTTAGAGATGCATTACAGGAGGTGAGGCCTTCGGTTTCACCAAATGAGCTCGGTACATACGAGGATTGGAACAAACAATTTGGGAGCTTATCACTAAGATTGTGCCAACCTCCAAGCCATGTATACGATGATGGCAGACCTGCCACAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173000.p1 GENE.S_Transcript_173000~~S_Transcript_173000.p1 ORF type:complete len:699 (+),score=139.29,AAA|PF00004.25|1.8e-38,Vps4_C|PF09336.6|3.7e-08 S_Transcript_173000:50-2098(+)
MAKQQEREREEQQPQQNWRKDVDQNIKRLQSLQFGADSAIENRDFRSSEVLSLRLIGFLDSRSQNDVDEAFVQPIRRDALSKLDSSRRALAPDSDRQAFEAAGRDPEKVFSMDVDIDRIKQSKYFRALLQQYKKENVGGLAGQEDGLGKMTRKTFKPTSDTDLSSWHGNNMKGRNNILEKGSPLSKNIGLGDCTILGKTRAGNNHMKGHIISTHSEEERILGNNQGVKRQYMETRSPRNYCANSPLNSEETNGEVSGNGFVTARAKLEMDAKQKRGFGGPSSASVSPLSDYNSNSRAYGGKSYGLSRHGVRGNFVPPIRSNGSNTGNLTSRIGGKCDDAMDDSIKRCLDVLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVVWPLLRPDIFKGCRAPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHEASRRLKTQFLIEMEGFNSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSPEARAWIVRNLLEKDGLFKLLKEDMDIICKLTEGYSGSDMKNLVKDASMGPLRDALRQGIEITKLNKEDMRPVTVQDFRDALQEVRPSVSPNELGTYEDWNKQFGSLSLRLCQPPSHVYDDGRPATE*

Click here to download the sequence:
Link to NCBI Protein BLAST