Transcript Information: S_Transcript_17301.p1


Annotated TAIR IDAT5G48655.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19731575-19732486 | Reverse length=203
E-Value7.1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.811143915869
Replicate 224.706257430765
Replicate 321.417370935794
Condition 2: 8 Hour
Replicate 125.845979969613
Replicate 226.495691706957
Replicate 322.887523004427
Condition 3: 24 Hour
Replicate 125.468919461384
Replicate 219.948331848306
Replicate 319.178052197439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17301.p1 GENE.S_Transcript_17301~~S_Transcript_17301.p1 ORF type:5prime_partial len:217 (+),score=50.71,zf-RING_2|PF13639.2|3.5e-09,zf-C3HC4|PF00097.21|4.2e-08,zf-C3HC4_3|PF13920.2|8.3e-08,zf-C3HC4_2|PF13923.2|8.8e-08,zf-RING_5|PF14634.2|1.5e-07,zf-C3HC4_4|PF15227.2|1.1e-05 S_Transcript_17301:3-653(+)
GCTCCTCGGAAGGGTGTTGGCTGGACTTCTCAGCGGAGGAAAATGGTATTAGACGTCGATCTCAATGTACCTCCATGTGAAAATCTTAATGAAGTTGGTACTTCTAGTCATGCTCCTGCTCTTGTAGAGTTGCAATTGGGTCAGCAACAAGCCCCTCCACAACCGGCACCCATTGATGTTGATTCACTTGATGATGACGTAATTGTATCTTCTCCGAGGGCCTTTGCAGAGGCCAAAAACAATTCAAGGAGGAATCGAGGGAGAAGAAATGTTGTTGATGTTGATTTAGATTCTGCAAGTAGGCCTGCTGCTAATAGCCGTCACAAACGTCAAAGAGTACCAGCAAATCAGCCTGTTATTAACTGCGAATCATATGTAAATCTGGAAAGCAGTGGTGCAAGTAAAAATCAGAAGTCTTTACCGCCGCAGCCAAAGAACATGCCTCCTCCTCCTCCGCCGGAACCTAAGTTTAGTTGCCCTGTTTGCATGGGTCCTTTGGTTGAAGAGATGTCCACAAAGTGTGGCCACATTTTCTGCAAGGCTTGCATTAAGCAGTCAATAGCTGCTCAGGGTAAATGCCCAACGTGCAGGAGAAAGGTGACAATGAAGGATACTATTAGAATCTACCTTCCAGCAACAAATTTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17301.p1 GENE.S_Transcript_17301~~S_Transcript_17301.p1 ORF type:5prime_partial len:217 (+),score=50.71,zf-RING_2|PF13639.2|3.5e-09,zf-C3HC4|PF00097.21|4.2e-08,zf-C3HC4_3|PF13920.2|8.3e-08,zf-C3HC4_2|PF13923.2|8.8e-08,zf-RING_5|PF14634.2|1.5e-07,zf-C3HC4_4|PF15227.2|1.1e-05 S_Transcript_17301:3-653(+)
APRKGVGWTSQRRKMVLDVDLNVPPCENLNEVGTSSHAPALVELQLGQQQAPPQPAPIDVDSLDDDVIVSSPRAFAEAKNNSRRNRGRRNVVDVDLDSASRPAANSRHKRQRVPANQPVINCESYVNLESSGASKNQKSLPPQPKNMPPPPPPEPKFSCPVCMGPLVEEMSTKCGHIFCKACIKQSIAAQGKCPTCRRKVTMKDTIRIYLPATNLT*

Click here to download the sequence:
Link to NCBI Protein BLAST