Transcript Information: S_Transcript_173119.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55443752573293
Replicate 20.45964144911489
Replicate 30.57633550261252
Condition 2: 8 Hour
Replicate 11.1106974123507
Replicate 20.93216035998861
Replicate 30.44408015843711
Condition 3: 24 Hour
Replicate 10.91020347877476
Replicate 20.70824411176086
Replicate 30.52545925843992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173119.p1 GENE.S_Transcript_173119~~S_Transcript_173119.p1 ORF type:internal len:96 (+),score=24.20 S_Transcript_173119:3-287(+)
GGAAGTTTATGTGCAGAAAGGCATGATAGTTCTAGTACTCGTGAAATCGACAGTGTCAAGTGCACGGTTTCAGGTGATCTGGGAATAATTTCTCCTTCTCAAAGCCCAAGAACCAAGAAAGAAGCTTCTGACCATCGGTTCCTGGTGCAAGGTACCAGTGATTGGGTTAATCGTTGGGGTGCGGAAAATTCAATGCGGAGTGAAGTTGCCGTTCATGAAGAAAATAGTCAACTAAGGGCAGCCTTGGAAGAAGCTGATCAGTCAATTCATGAGCTTAGGCAGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173119.p1 GENE.S_Transcript_173119~~S_Transcript_173119.p1 ORF type:internal len:96 (+),score=24.20 S_Transcript_173119:3-287(+)
GSLCAERHDSSSTREIDSVKCTVSGDLGIISPSQSPRTKKEASDHRFLVQGTSDWVNRWGAENSMRSEVAVHEENSQLRAALEEADQSIHELRQE

Click here to download the sequence:
Link to NCBI Protein BLAST