Transcript Information: S_Transcript_173150.p1


Annotated TAIR IDAT2G36710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15389614-15391200 | Reverse length=407
E-Value1.3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2414455437978
Replicate 24.5548984892934
Replicate 35.8302843102995
Condition 2: 8 Hour
Replicate 11.2382484700271
Replicate 20.86600704411845
Replicate 30.82512958470896
Condition 3: 24 Hour
Replicate 14.5099114303162
Replicate 25.8487255680896
Replicate 33.5799030768552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173150.p1 GENE.S_Transcript_173150~~S_Transcript_173150.p1 ORF type:complete len:155 (-),score=48.86,Ovate|PF04844.9|5e-25 S_Transcript_173150:334-735(-)
ATGGAGGAAATGGTGGAAGCTCATGGATTGAAGGATTGGCAAGGGCTTGAAGAGTTGCTAAGGTGTTACTTAAAGATTAATGGTAAAAACAATCATGGGTATATTGTAGGTGCTTTTATTGACTTGTTGGTTAGATTTTCTTTTGTATCCTCCCCTTCTAATTCAACATCAACATCATCATCATCAACCACAATTACATCATCATCACCATCCACATGCCTTTCTTCTTCTAACTCTAATAATTCCTCCCCTTCTTCTCCTCTTTCTTTGCCTTCCTCTTCTCTTACTACCCCTTGTCTCTCCTCAGTCTTGGATGAAGATCATCATCATGATGATAATGACAATGATGATGATAATGGTAATGATGGTAATCATGGTGATGATGATGATTCATCTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173150.p1 GENE.S_Transcript_173150~~S_Transcript_173150.p1 ORF type:complete len:155 (-),score=48.86,Ovate|PF04844.9|5e-25 S_Transcript_173150:334-735(-)
MEEMVEAHGLKDWQGLEELLRCYLKINGKNNHGYIVGAFIDLLVRFSFVSSPSNSTSTSSSSTTITSSSPSTCLSSSNSNNSSPSSPLSLPSSSLTTPCLSSVLDEDHHHDDNDNDDDNGNDGNHGDDDDSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST