Transcript Information: S_Transcript_173176.p2


Annotated TAIR IDAT1G48050.1
Annotated Gene NameKu80 family protein
Annotated Gene Symbol(s)KU80, ATKU80
Annotation TypeOrtholog
Chromosome Positionchr1:17723498-17726859 | Forward length=680
E-Value3.8E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7861074654483
Replicate 21.1845793051015
Replicate 31.3615442746282
Condition 2: 8 Hour
Replicate 10.85874054968321
Replicate 21.5014663516595
Replicate 31.1444750391936
Condition 3: 24 Hour
Replicate 11.026269694189
Replicate 20.60842447184825
Replicate 31.3542037264492


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173176.p2 GENE.S_Transcript_173176~~S_Transcript_173176.p2 ORF type:5prime_partial len:149 (+),score=27.64,Ku_N|PF03731.11|8e-12 S_Transcript_173176:2-448(+)
GCAAAACTCAAAAGTCACTCTCTGCTTTTAGTATGCTCCCTTCCTTTCCTTGCGCAAGTCTCAACATTCAAGCTTCTTCAGCAATCTTCGAATTCCCTCGAAAAACGTTTTTTTGAATTTTCTCTCTCTTTACTGACAATGGCTCGCAATAAGGAAGCACTCATTTTACTGCTTGATGTTAGTCCGAAAATGCATGGTGTCCTTCCACAGGTTGAGAAAGTCTGTGCCATGCTTCTTGAAAAGAAGCTTATTTATAACAAATATGATGAAGTGGGAATTGTGTTATTTGGAACAGAAGAAACGGACAATGCACTGGCAGTGGAAATTGGTGGCTACCAAAATATCATGGTTCTGAGGCATATAAAAGTTGTTGACGGAGATTTAGTTGATGTTATGGAGAAACTTCCTCGAGGAACGGTTCCTGGTGACTGTATCCTGCTTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173176.p2 GENE.S_Transcript_173176~~S_Transcript_173176.p2 ORF type:5prime_partial len:149 (+),score=27.64,Ku_N|PF03731.11|8e-12 S_Transcript_173176:2-448(+)
AKLKSHSLLLVCSLPFLAQVSTFKLLQQSSNSLEKRFFEFSLSLLTMARNKEALILLLDVSPKMHGVLPQVEKVCAMLLEKKLIYNKYDEVGIVLFGTEETDNALAVEIGGYQNIMVLRHIKVVDGDLVDVMEKLPRGTVPGDCILLN*

Click here to download the sequence:
Link to NCBI Protein BLAST