Transcript Information: S_Transcript_173181.p1


Annotated TAIR IDAT2G31440.1
Annotated Gene NameINVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13399309-13400971 | Reverse length=250
E-Value1.8E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2682633095836
Replicate 24.4512645598495
Replicate 34.529794827551
Condition 2: 8 Hour
Replicate 17.4825930937309
Replicate 25.6910843030884
Replicate 36.9183014156518
Condition 3: 24 Hour
Replicate 13.8324357001042
Replicate 25.1689394823248
Replicate 36.8586261101631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173181.p1 GENE.S_Transcript_173181~~S_Transcript_173181.p1 ORF type:complete len:114 (-),score=16.83,Aph-1|PF06105.8|2e-26 S_Transcript_173181:388-729(-)
ATGACGGTAGCAGCAGGAATAGGATACGCACTCATAGCATTAGGCCCCTCTTCATCTCTCTTCATCTCTGTCATTTCCAAAAAACCCTTTTTGATCCTCACTCTTCTCTCAAGTACATTATTATGGTTGGTGAGTTTGATTGTGTTATCGGGAGTATGGAGGGGTTTTCTTCCTTTCAATTCAACAGCAGCTTGGTGGCCTTTTGGCCTTCTTGTCTTTTCTTCTGTTTGTTTTCAAGAAGCCCTTCGCATTCTTTTCTGGAAAGCTTATAGGAGGTTGGAAGATATATTGGATGCATTTGCTGATAGGGTCTCAAAACCTTCGCTTGTTTTTGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173181.p1 GENE.S_Transcript_173181~~S_Transcript_173181.p1 ORF type:complete len:114 (-),score=16.83,Aph-1|PF06105.8|2e-26 S_Transcript_173181:388-729(-)
MTVAAGIGYALIALGPSSSLFISVISKKPFLILTLLSSTLLWLVSLIVLSGVWRGFLPFNSTAAWWPFGLLVFSSVCFQEALRILFWKAYRRLEDILDAFADRVSKPSLVFDR*

Click here to download the sequence:
Link to NCBI Protein BLAST