Transcript Information: S_Transcript_173237.p1


Annotated TAIR IDAT5G18810.1
Annotated Gene NameSC35-like splicing factor 28
Annotated Gene Symbol(s)SCL28, At-SCL28
Annotation TypeHomolog
Chromosome Positionchr5:6268925-6271158 | Reverse length=236
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.988838799133
Replicate 211.470309690379
Replicate 310.468821012972
Condition 2: 8 Hour
Replicate 115.103127890383
Replicate 217.505823206152
Replicate 315.209450943607
Condition 3: 24 Hour
Replicate 112.805621356555
Replicate 211.903009793413
Replicate 310.102198156956


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173237.p1 GENE.S_Transcript_173237~~S_Transcript_173237.p1 ORF type:5prime_partial len:377 (-),score=76.83,RRM_1|PF00076.18|5.9e-18,RRM_6|PF14259.2|3.2e-14,RRM_5|PF13893.2|3.7e-06 S_Transcript_173237:209-1339(-)
CGAAGCCAAAGCAGGAGTTACAGCCCGAGGCGAGGAAGGAGCCGTACACCACCTCGTCCTTGTCGTAAGCGCTACGATGACCCTCATGATCATCATCGATACCGCTCTTCTTCTTACCGTGGCCGCCGTTCTCCCGCTCCTTCTGGTCTTCTCGTTCGTAATGTCGCCCTTGATACCAGGCCTGAAGATCTGAGGATCCCCTTTGAGAAGTTTGGTGCAGTGAAGGACGTTTATTTGCCTAGAAACTACTATACTGGGGAGCCACGAGGCTTTGGATTTGTGAAATTTCGGCATCCTGATGATGCAGCTGAAGCAAAGGAACGACTGGATCACACAATAATTGGTGGGCGGGAGATACGAATAGTATATGCTGAGGAGAATCGCAAAACTCCTCAAGAAATGCGCAGGACTTCACATACAAGTGGGCCTAGTGGCAGATATGGAGGGAGAAGGAGGACTCCACCAAGGTCGCCGAGGCGCCGATATCGTTCCTACTCAAGGTCACCGTCTTCTGTAAGGCATCATTCAAGGTCTGTTTCTAGGTCCCGTTCCCCTCGCAGCGAAAGAGATTACAAGTCAACCAAGAGGTCCGCCAGCCCAAGGGAAAGCTCTCCTTGTGATGAAAGAGGATACAGGAAAAGGGAGAGGTCTCAAAGTCCAAGGAAGACTTCAGCAGGTGAGGAAAAGGAATACAAGTCTAGGAGGTCTTACAGTCCAAGAGAGTTGTCCCCTCATGATGGGAACTACTGGTCATCTAGGAGGTCTTTTAGTCCAAGTGAGGAATCTCCAAATTGTATGGGCAGCAAGACCAAACAGAGGGTTGCTACTTCAAGCAAAGTTTCTCCACATGATGATGACTATGAGTCAAAGAGGTCTCCTAGTCCTGAATATTTTTCCAAGCATGGAGTTAGGAGAGGTGCCTTGAGCCAATTTACACCTAGTCCGAGGTGGCTCTCCCCGATTGACGAGAGGGATGACAGGTTGAAAGATCGGTCCCTTAGTACAGAGGAAAATGATGATGGACATTCTCTTGATGGAAGAAGGGATTTGGCTTCCAGAAAGTCTGTCAGCCCTAGGAGGAATGGTAGGAGTGTGTCTCGTTCTCAGTCTCAATCTTATAGTCCCCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173237.p1 GENE.S_Transcript_173237~~S_Transcript_173237.p1 ORF type:5prime_partial len:377 (-),score=76.83,RRM_1|PF00076.18|5.9e-18,RRM_6|PF14259.2|3.2e-14,RRM_5|PF13893.2|3.7e-06 S_Transcript_173237:209-1339(-)
RSQSRSYSPRRGRSRTPPRPCRKRYDDPHDHHRYRSSSYRGRRSPAPSGLLVRNVALDTRPEDLRIPFEKFGAVKDVYLPRNYYTGEPRGFGFVKFRHPDDAAEAKERLDHTIIGGREIRIVYAEENRKTPQEMRRTSHTSGPSGRYGGRRRTPPRSPRRRYRSYSRSPSSVRHHSRSVSRSRSPRSERDYKSTKRSASPRESSPCDERGYRKRERSQSPRKTSAGEEKEYKSRRSYSPRELSPHDGNYWSSRRSFSPSEESPNCMGSKTKQRVATSSKVSPHDDDYESKRSPSPEYFSKHGVRRGALSQFTPSPRWLSPIDERDDRLKDRSLSTEENDDGHSLDGRRDLASRKSVSPRRNGRSVSRSQSQSYSPR*

Click here to download the sequence:
Link to NCBI Protein BLAST