Transcript Information: S_Transcript_173316.p1


Annotated TAIR IDAT2G47680.1
Annotated Gene Namezinc finger (CCCH type) helicase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19545828-19550871 | Reverse length=1015
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.976414865115
Replicate 25.2017959119344
Replicate 35.6977558632262
Condition 2: 8 Hour
Replicate 110.229252265942
Replicate 26.9116280350375
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 19.0576346180512
Replicate 25.1592416596563
Replicate 34.7163172464851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173316.p1 GENE.S_Transcript_173316~~S_Transcript_173316.p1 ORF type:5prime_partial len:123 (-),score=8.95 S_Transcript_173316:12-380(-)
GAAGCGAATCCTTCTCTGATTGGTAGGAAGGAGGAGATCTTCTTGGCAAATCTGTGTGCTTACCAATTTTGGCAACGCATATATAAGGATAACCTTCGCCTCCAGCATTTGAAGCAGCTTTTGGATGTTGATGAGATAAAAGCTCCGCAATCATTGCTCTCCAAAATTGAAGACGAGTGGTGCTCCTTTCATAACCTATTGCAGTCGTCTATGCATCAAATCTCTGAAATATATGATGACATTCTGTGTTCATTGCATCGTTATCGGCCGAAATTTCTTGCCACATCTTCTGACTGTCCATCCTACTACCATCCTTACGAGTTTAGGCATCCGTGTTTTAGAGTGTCCGCCCAGCAACGATACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173316.p1 GENE.S_Transcript_173316~~S_Transcript_173316.p1 ORF type:5prime_partial len:123 (-),score=8.95 S_Transcript_173316:12-380(-)
EANPSLIGRKEEIFLANLCAYQFWQRIYKDNLRLQHLKQLLDVDEIKAPQSLLSKIEDEWCSFHNLLQSSMHQISEIYDDILCSLHRYRPKFLATSSDCPSYYHPYEFRHPCFRVSAQQRYC*

Click here to download the sequence:
Link to NCBI Protein BLAST