Transcript Information: S_Transcript_173737.p1


Annotated TAIR IDAT5G23490.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7919831-7926499 | Forward length=729
E-Value4.1E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19009286596558
Replicate 21.1031394778757
Replicate 30.79040297501145
Condition 2: 8 Hour
Replicate 11.2185937324076
Replicate 21.5979891885519
Replicate 30.91353632592777
Condition 3: 24 Hour
Replicate 11.0922441745297
Replicate 21.9426124208298
Replicate 31.4412596802924


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173737.p1 GENE.S_Transcript_173737~~S_Transcript_173737.p1 ORF type:5prime_partial len:140 (-),score=30.91 S_Transcript_173737:88-507(-)
TCGCCTTATTCACACACACTTGAGGATCCAAATTCATCCTATCCCTATCTTCAACCAGTTCCTGAAGAACCGTCGTCCTCTTTTTCTGAGGCTGCCGATGATGATCCTCTACCAGCTATAGAGGGTCTCCAAATATCAGGCGAAGCTTATCCTGGGCGAGAACTCCAAGCTTGTGGATATTCTATCAATGGAACAACAAGTTGTAACTTTGAGTGGGTGCGGCATTATGAAGATGGATCTGTGAAGTATATAGATGGGGCAAAACAACCAGTCTACCTCGTCACTGCTGATGATGTGGAGCACTATCTGGCTATTGAAGTCCAACCTTTGGATGACAGGAAGAGAAAGGGGGCACTTGTAAGAGTGTTTGCTAACGAGAACAGAAAAATCACTTGTGGTAAGCATAAGCATTCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173737.p1 GENE.S_Transcript_173737~~S_Transcript_173737.p1 ORF type:5prime_partial len:140 (-),score=30.91 S_Transcript_173737:88-507(-)
SPYSHTLEDPNSSYPYLQPVPEEPSSSFSEAADDDPLPAIEGLQISGEAYPGRELQACGYSINGTTSCNFEWVRHYEDGSVKYIDGAKQPVYLVTADDVEHYLAIEVQPLDDRKRKGALVRVFANENRKITCGKHKHSN*

Click here to download the sequence:
Link to NCBI Protein BLAST