Transcript Information: S_Transcript_173796.p1


Annotated TAIR IDAT1G08820.1
Annotated Gene Namevamp/synaptobrevin-associated protein 27-2
Annotated Gene Symbol(s)VAP27-2
Annotation TypeOrtholog
Chromosome Positionchr1:2821810-2824412 | Reverse length=386
E-Value6.3E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.60053899995
Replicate 210.182825949622
Replicate 37.2115826993566
Condition 2: 8 Hour
Replicate 114.900432977997
Replicate 213.480472898297
Replicate 312.434244436239
Condition 3: 24 Hour
Replicate 111.342535658578
Replicate 26.3197166895584
Replicate 38.5690279068664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173796.p1 GENE.S_Transcript_173796~~S_Transcript_173796.p1 ORF type:complete len:312 (-),score=61.50,Motile_Sperm|PF00635.22|2.9e-28,Motile_Sperm|PF00635.22|3.3e+03 S_Transcript_173796:246-1181(-)
ATGAGTACCCAGTTGGAGATTCAACCTCGTGAGCTCAAATTCGTTGTTGAATTGAACAAACAGAGCAAGTGTACAGTGAAACTCAACAACAAGACAGACCAACATGTTGCTTTTAAGGTTAAGACGACGTCGCCAAAGAAATACTGTGTGCGGCCTAATGTTGGTATCCTTTCCCCCAAAGCTGCTCATGAATTCATTGTCATTATGCAAGCTCCAAAAACAACTCCAGTTGATATGACATGCAAAGACAAGTTTTTGATTCAAAGCACAATTGTTACTGCAGAAACACTGGAGGACGACATAACATCTGAAATGTTTGCTAAGGATAGTGGGAGATATGTTGAAGAAAGCAAACTCAGAGTATACCTTGTTAATCCCCCACCACCAGTTTCCCCCGACACATTACCCATCAACGGCACTGTAAAGCAGGTTGAAGACCACAGGGAAGCCAAAATAGAGAACAATGAGGACATAAAGCCAGTGAAGAGTACAGAGGTTGAAGCCATTCAAGATTTGCAAACAAAACCAACAAAAAATGTTACATTTGAATCAACGAAGGCTGTATACTCAAGTATAGTGACAGATGTCGAACTTAACAAGGACGTAGAACCAATAACGAGAAAAGGTGAAGAAGCGAAAGAAATTGAGCCAAGAATTCCAATGAATGAGGAGGAGCAGAAAATATTCAAGGACATTGAAGAAATGAAATCAAAACTACATGAACTTGAGTCAAAGTTAGGCAAGGCTGAAGTGACCATTACAAAGTTAACAGAGGAGAGGAGGCTGGCAGTTCAAGACAGGGAGTCACTGCAACAAGAAATGGCTTTCCTGAGGAGGAGAAAAGTAGAAAGAAGAGTACAGGATGGATTTCCGCTTTTATTTGTGTGCATGGTAGCTCTCCTGAGTATTGTGGTAGGATATGGCTTTCATCCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173796.p1 GENE.S_Transcript_173796~~S_Transcript_173796.p1 ORF type:complete len:312 (-),score=61.50,Motile_Sperm|PF00635.22|2.9e-28,Motile_Sperm|PF00635.22|3.3e+03 S_Transcript_173796:246-1181(-)
MSTQLEIQPRELKFVVELNKQSKCTVKLNNKTDQHVAFKVKTTSPKKYCVRPNVGILSPKAAHEFIVIMQAPKTTPVDMTCKDKFLIQSTIVTAETLEDDITSEMFAKDSGRYVEESKLRVYLVNPPPPVSPDTLPINGTVKQVEDHREAKIENNEDIKPVKSTEVEAIQDLQTKPTKNVTFESTKAVYSSIVTDVELNKDVEPITRKGEEAKEIEPRIPMNEEEQKIFKDIEEMKSKLHELESKLGKAEVTITKLTEERRLAVQDRESLQQEMAFLRRRKVERRVQDGFPLLFVCMVALLSIVVGYGFHP*

Click here to download the sequence:
Link to NCBI Protein BLAST