Transcript Information: S_Transcript_173852.p1


Annotated TAIR IDAT2G25170.1
Annotated Gene Namechromatin remodeling factor CHD3 (PICKLE)
Annotated Gene Symbol(s)PKL, GYM, CHD3, CHR6, SSL2
Annotation TypeHomolog
Chromosome Positionchr2:10714411-10723763 | Forward length=1384
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.967153118167
Replicate 213.103281107763
Replicate 311.046918060228
Condition 2: 8 Hour
Replicate 116.129356128187
Replicate 218.624280085864
Replicate 314.499104462272
Condition 3: 24 Hour
Replicate 116.1896090844
Replicate 212.53987544072
Replicate 313.955344366282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173852.p1 GENE.S_Transcript_173852~~S_Transcript_173852.p1 ORF type:5prime_partial len:197 (-),score=60.33 S_Transcript_173852:51-641(-)
AAGTCTGATGGTGTCTGTGGTGGAGAACCTGAAAATACAAATAAAGCAGCGGATGTGACAGCTATGACTTCTGTGGACGTTGCTGCAGGACCATTGGACAAACTTCCCCACAATAAAGTGCTTGCTGTAGACGAAGTTTCTTCTGCCAGTTATGACGCTGACCCTAGAAGGCAGGTACTAGCGCAGCACTATAATGAGATATGCAAAGTATTAGCTGAAGATGAAAAAGAAACTGTCAAAGCTTTTCTTTCAAATGAAGCTGATCCTAGTTTGGGCAAGCGACTAATTCAGCTAGAAACTATTTTTGAAAAGGTAAATCAAATTCTTTCGTCACCACAGAGTCATCCTAGTCTCCATGAACCCACATCAAAGGACGAGAAACAGGAGACTGGAGATCGGATTGGTGGACAAAGAACTAGTGTGCCCTCTGATTCAACTCCTGCTTTAAAGTCAGAGAACATCATGGAGGTTGAAGCGACCGAAAAAAATGGCCAAACTGAAGGCAAACCTGAAGATGTGGAGATGGCAAAAGCAGATGTTGATGTGAAGAAATCAGAAGAGGAATCTGGTGTAGTTGTATTGGATGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173852.p1 GENE.S_Transcript_173852~~S_Transcript_173852.p1 ORF type:5prime_partial len:197 (-),score=60.33 S_Transcript_173852:51-641(-)
KSDGVCGGEPENTNKAADVTAMTSVDVAAGPLDKLPHNKVLAVDEVSSASYDADPRRQVLAQHYNEICKVLAEDEKETVKAFLSNEADPSLGKRLIQLETIFEKVNQILSSPQSHPSLHEPTSKDEKQETGDRIGGQRTSVPSDSTPALKSENIMEVEATEKNGQTEGKPEDVEMAKADVDVKKSEEESGVVVLDD*

Click here to download the sequence:
Link to NCBI Protein BLAST