Transcript Information: S_Transcript_17397.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeHomolog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2353445052814
Replicate 24.7019059712736
Replicate 33.8296391867586
Condition 2: 8 Hour
Replicate 15.3604806261646
Replicate 23.9120172484768
Replicate 35.3580819116347
Condition 3: 24 Hour
Replicate 14.4167250773332
Replicate 27.0592199991902
Replicate 35.3751897912543


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17397.p1 GENE.S_Transcript_17397~~S_Transcript_17397.p1 ORF type:internal len:183 (-),score=54.42,Vps35|PF03635.13|0.00037,Vps35|PF03635.13|1.5e-23 S_Transcript_17397:1-546(-)
GAAGAGATGTTCAAGATCATAACCCTTATCAAGGATACTGATGTCACCGTTTATGATGAGGATGACGAGGACTTTAAGGAGGAGCAGAATGCTGTTGCACGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACCCTTATCAAGGATACTGATGTCACCGTTTATGATGAGGATGACGAGGACTTTAAGGAGGAGCAGAATGCTGTTGCACGACTTATCCAAATGCTTGACAGTGATGAACCGGAAGAGATGTTCAAGATCATAACTGTTGTGCAGAAGCACATACTGGCAGGTGGTGTGAAGCGTTTACCCTTCACGGTCCCGCCCCTTGTTTTTACCTCTCTTAAGCTGGTTAGGAGGCTTCAGAACCAAGATACGAGTAAACTTGGAGAAGCAGCTGCTTCAACACAAAAGAAAATTTACCAGTTGTTAAATCAGCTTATTGAGGCTCTCTCAAATGTTCCGGCGCCTGAGCTGGCCTTGCGTCTGTACTTGCAATGCGCTGAGGCTGCAAATGATTCTGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17397.p1 GENE.S_Transcript_17397~~S_Transcript_17397.p1 ORF type:internal len:183 (-),score=54.42,Vps35|PF03635.13|0.00037,Vps35|PF03635.13|1.5e-23 S_Transcript_17397:1-546(-)
EEMFKIITLIKDTDVTVYDEDDEDFKEEQNAVARLIQMLDSDEPEEMFKIITLIKDTDVTVYDEDDEDFKEEQNAVARLIQMLDSDEPEEMFKIITVVQKHILAGGVKRLPFTVPPLVFTSLKLVRRLQNQDTSKLGEAAASTQKKIYQLLNQLIEALSNVPAPELALRLYLQCAEAANDSD

Click here to download the sequence:
Link to NCBI Protein BLAST