Transcript Information: S_Transcript_173987.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value9.9E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6802453229239
Replicate 23.0085622123884
Replicate 33.2438804573922
Condition 2: 8 Hour
Replicate 11.9808168871645
Replicate 23.05070663269
Replicate 32.6118232243258
Condition 3: 24 Hour
Replicate 12.4176155641764
Replicate 22.1947169313064
Replicate 35.6824368817851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173987.p1 GENE.S_Transcript_173987~~S_Transcript_173987.p1 ORF type:internal len:506 (-),score=-0.57,DUF825|PF05695.8|0 S_Transcript_173987:3-1517(-)
AGGAAATATACGATCAACCAACATTTATCGAATTTGAAAAAGAGTCAGAAGAAATGGTTCGATCCTCTTATTTTTATTTCTCGAACCGAGAGATTCATGAATCGGGATAGATACAAATGGTTCAATGGGAGCAAGAATTTCCAGGAACATTTGGAACAGTTCGTTTCTGAGCAGAAGAGCCGTTTTCAAGTAGTGTTTGATCGATTACGTCAATATTCGATTGATTGGTCTGAGGTTATCGCCAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTCACTTCTTTTTTTGTCCAAGTTGCTTCTCTTTTTGTCTAACTCACTTCCTTTTTTCTTTGTGAGTTTCGGGAATATCCCCATTCATAGGTCCGAGATCCACATTTATGAATTGAAAGGTCCGAATGATCAACTCTACAATCTGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATGGAAAGCCTTCTTATTCTTATTGGATGATCATGATACTTTTCAAAAATCGAAATTCTTGGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGATTGACTCATTCCATACTAGAAATAATCGCGGGAAATCCTTTGATAACACGGATTCCTATTTCTCAATGATATCCCACGATCAAAACAATTGGCTGAATCCCGTAAAACCATTTCATAGAAGTTCATTGATATCTTCTTTTTATAAAGCAAATCGACTTCGATTCTTGAATAATCCACATCACTTCTGCCTCTATTGTAACAAAAGGTTCCCTTTTTATATGGAAAAGGCCCGTATCAATAATTCTGATTTTACGTATAGACAATTCCTCAATATCTTGTTCATTCGCAACAAAATATTTTCTTTGTGTGTCGGTAAAAAAAAACATGCTTTTTTGGAGAGAGATACTATTTCACCAATCGAGTCACAGGTATCGAACATATTCATACCTAACGATTTTCCAATTCGATCCGATCTATCCGTTCGTAGAACTATTTACTCGATCGCAGACATTTCCGGAACACCTCTAACAGAGGGACAAATAGTCCATTTTGAAAGAACTTATTGTCAACCTCTTTCAGATATGAATCTATCTGATTCAGAAAGGAAGAACTTGCATCAGTATCTCAATTTCAATTCAAACATGGGTTTGATTTACACTCCATGTTCTGAGAAATATTTCCCATCGGAAAAGAGGAAAAAACAGAGTCTTTGTCTAAAGAAATGCGTTGAGAAAGGGCAGATGTATAGAACCTTTCGACGAGATAGTGTTTTTTCAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTGGATATTTTTAGATACTTTTTCAGATCTATTGCCGATACTAAGTAGCAGTCAAAAATTTGTATCTATTTTTCATGATATTATGCACGGATCAGATATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAATGGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173987.p1 GENE.S_Transcript_173987~~S_Transcript_173987.p1 ORF type:internal len:506 (-),score=-0.57,DUF825|PF05695.8|0 S_Transcript_173987:3-1517(-)
RKYTINQHLSNLKKSQKKWFDPLIFISRTERFMNRDRYKWFNGSKNFQEHLEQFVSEQKSRFQVVFDRLRQYSIDWSEVIAKKDLSKSLRFFLSKSLLFLSKLLLFLSNSLPFFFVSFGNIPIHRSEIHIYELKGPNDQLYNLLLESIGLQIVHLKKWKAFLFLLDDHDTFQKSKFLGGTISPFLFNKIPKWMIDSFHTRNNRGKSFDNTDSYFSMISHDQNNWLNPVKPFHRSSLISSFYKANRLRFLNNPHHFCLYCNKRFPFYMEKARINNSDFTYRQFLNILFIRNKIFSLCVGKKKHAFLERDTISPIESQVSNIFIPNDFPIRSDLSVRRTIYSIADISGTPLTEGQIVHFERTYCQPLSDMNLSDSERKNLHQYLNFNSNMGLIYTPCSEKYFPSEKRKKQSLCLKKCVEKGQMYRTFRRDSVFSTLSKWNLFQTYMPWFLTSTGYKYLNWIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLPQWN

Click here to download the sequence:
Link to NCBI Protein BLAST