Transcript Information: S_Transcript_173995.p3


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61890700546931
Replicate 21.2827203231113
Replicate 30.857801678307
Condition 2: 8 Hour
Replicate 11.7357875839527
Replicate 21.0405510995222
Replicate 30.99143477232471
Condition 3: 24 Hour
Replicate 11.2700513657322
Replicate 21.3176634637411
Replicate 31.46639793053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_173995.p3 GENE.S_Transcript_173995~~S_Transcript_173995.p3 ORF type:5prime_partial len:86 (+),score=0.59,RVT_1|PF00078.23|8.7e-16 S_Transcript_173995:3-260(+)
ATTAAAAAAGAAAAAAAGGGTTGGTTTGCACTTAAAATCGATCTTGAAAAGGCCTACGATAGAATGGAATGGAGCTTCATTAGAAATTCCCTTGCATATCATCATTTGGATAATGAATTCATTAAACTTATTATGAGCTGTATATCCACTACCTCTTGTTCTATTCTTGTTAATAGGAACACCACGGAATGGTTCGACCCTTCGAGGGGCATCCAACAGGGAGACCCCCTCTCCCCTACATTTATATCCTCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_173995.p3 GENE.S_Transcript_173995~~S_Transcript_173995.p3 ORF type:5prime_partial len:86 (+),score=0.59,RVT_1|PF00078.23|8.7e-16 S_Transcript_173995:3-260(+)
IKKEKKGWFALKIDLEKAYDRMEWSFIRNSLAYHHLDNEFIKLIMSCISTTSCSILVNRNTTEWFDPSRGIQQGDPLSPTFISSA*

Click here to download the sequence:
Link to NCBI Protein BLAST