Transcript Information: S_Transcript_174086.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.081412507592306
Replicate 30.13610875338451
Condition 2: 8 Hour
Replicate 10.15738295436999
Replicate 20.16510589402012
Replicate 30.15731252845005
Condition 3: 24 Hour
Replicate 10.080608426164554
Replicate 20.083630301019732
Replicate 30.18614054911525


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174086.p1 GENE.S_Transcript_174086~~S_Transcript_174086.p1 ORF type:complete len:271 (-),score=41.99,rve|PF00665.22|1.6e-18,gag_pre-integrs|PF13976.2|4.1e-14 S_Transcript_174086:214-1026(-)
ATGGGCAACGGGGTTGTTGTACATTCAACAGGCAGATGCACTATTGCAGTTCAAACAAAGAAAGGTACTAAGTACATCAATGATGTTCTTCTTATTCCGGATCTTGATGAAAATCTACCAAGTGTACCTCAAATGATTAAAAATGGTCACATACTAGTTTTTGAGAATAACCATTGGACTATATTCGATCTGAAAAGGAAAGAAATCACCAAAGTTGGCATGGAGAACAAGAGCTTCCCTCGAAAGTGGGAATATCCTATAGAGACAACGGGTAAAACTCTCATTGATGACACTTGGTTATGGCATAGAAGGTATGGACACTTTAATGTGCGTGCCCTTAATGACCTTCACAACAAAGGGATGGTGAGAGACTTTCCTAACATTCTTCTGTCCAAGGACCTATGTGAAGCATGCCAACTTGGGAAGCAACATAGGAAGCCGTTCCCTAAGGAGAAAGTTTGGCGCGCCACCGAGAAGTTGGAGCTTGTTCACACTGATGTTTGTGGGCCACATCCGACAATATCTCTCAGTGGGAATCGTTATTTCATCCTCTTCATTGATGATTTCACTCGCATGGCGTGGGTGTACTTCATGAAGGAAATGTCCCAAGTGCCCACTATCTTCAAAAGGTTCAAGTCCTTTGTAGAAACTCAAAGTGGGTGCAAATTGAAGAAAATCAGGTCTGATAGGGGTAAAGAATATACCTCATCAAAATTGGATAAATTTTGCGAAGAAGGCATTGAACATCAGCTCAAGGTTGGCTATACACCACAACAAAATGGAGTTTTGAAAGAAAAAATCGAACGGTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174086.p1 GENE.S_Transcript_174086~~S_Transcript_174086.p1 ORF type:complete len:271 (-),score=41.99,rve|PF00665.22|1.6e-18,gag_pre-integrs|PF13976.2|4.1e-14 S_Transcript_174086:214-1026(-)
MGNGVVVHSTGRCTIAVQTKKGTKYINDVLLIPDLDENLPSVPQMIKNGHILVFENNHWTIFDLKRKEITKVGMENKSFPRKWEYPIETTGKTLIDDTWLWHRRYGHFNVRALNDLHNKGMVRDFPNILLSKDLCEACQLGKQHRKPFPKEKVWRATEKLELVHTDVCGPHPTISLSGNRYFILFIDDFTRMAWVYFMKEMSQVPTIFKRFKSFVETQSGCKLKKIRSDRGKEYTSSKLDKFCEEGIEHQLKVGYTPQQNGVLKEKIERL*

Click here to download the sequence:
Link to NCBI Protein BLAST