Transcript Information: S_Transcript_174349.p1


Annotated TAIR IDAT5G01450.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:183693-186244 | Reverse length=444
E-Value2E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3676917123005
Replicate 20.89762955373187
Replicate 30.90831462510238
Condition 2: 8 Hour
Replicate 11.3242747734408
Replicate 21.8683128414333
Replicate 31.3693263986069
Condition 3: 24 Hour
Replicate 11.0290951537325
Replicate 21.4073887274391
Replicate 31.4582338307026


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174349.p1 GENE.S_Transcript_174349~~S_Transcript_174349.p1 ORF type:complete len:467 (+),score=67.29,DUF4793|PF16041.1|2.7e+03,DUF4793|PF16041.1|2.8e-28,DUF4792|PF16040.1|7.4e-22,zf-C3HC4_3|PF13920.2|2.4e+03,zf-C3HC4_3|PF13920.2|7.6e-14 S_Transcript_174349:342-1742(+)
ATGTGGGTATTTCACCAAATGGAACAACAAAACCGTACTATACCTTTACCATCTTCTAACAATGATGTTGTTGTTGTTGTTGATTCTTACTCCCTTTCTTCTGCTTCAGTGCCGTTAGTTGTAGAAACAGAGGTAAATACTCAAGATCATAACAATGGCCACCAACGGCGGCCAAGAAATGATGCTTACAGGTTCAGTGATCAAGGGGCCTCTAGTTTTCAGTCCGGTGACTTCAGAAATGACGCTTGGTCTTGCTTAGTCGTGCTTTTGGCTTTCTGGTTCTTTGCATCTATTACCCTGATTCTTGGCTACTATGGATCTTTCACCTTACACCTGGGCCCATATTGCTCTTACTTGGTTGAAGCTAGTCCAATTTTTGTGAATGCTATTAAGGCACAGCAAGTGCAATATCAAACAGAAGGCCCCATGCTATATGGGTTTCACAAGAAACCTTCACTTGAGGTTAAAACTAATTGGTCTCAAAGTCAGAAAGCAATTGTAGAGCCTGGTGAATATAAGTCTTGGGCATATTACCTTAATGCTGGATCACAAATTAACATATCATATGATGTGATTTTGCCAAGTTCTACTCCCTTGTCATTCGCAATTGCCCAAGGACAAGACAACCTCTTTGATTGGATGAATGATCCTTCATATCCTAACACTACATTGTGTTGGAAAATCATAAATGGAAGCGGTAATATTACACAGGACATTACAACTTCTGATTCTTACTATATAGCACTGGCTACCTTAAACAAAGAGACGGCGGTGGTTGATCTGAACATTACCATTCGATCTCTTCTGTATAATACCAGTAATGCATACGTCAAGTGTTCTTTGAATAACCATGTTTGCAGCTTCAAGCTTCTGATTCAGAGGCCAAATGCTGCTATTTTAACATCTCCCGGTCCAGGACAGGTTAACGACAAAGATGATTGGCATGTAAAAGTGTCGTTTGGAGCCCAGTGGGTAACATATTTGGTAGGATCAATTACGATGACCACGATCATGTTAGCAATGTTCAGTTGCTGTAACAAGTGTCAAGTAGACAATGTGGCAATGGAAAATGGAGCGGAGCAAGAGCCATTGCTTTCCCCTAAAGACGACAGTGGCTCAAGCGGGGGTTCATCTTATGACTCGGTTTCTAGTGATGAGGATCTTGAAGAGAAGCTCCTAGAGAGTGCCCTTGAAGGAAAAGTCCCAAAAGAAGGGGAAGCTAATATCAATCCTCGTCTTTTGTGTGTCATATGCTTTGATGCTCCTCGCGATTGCTTTTTCCTCCCTTGTGGACATTGTGCTGCTTGTTTCACTTGTGGATCAAGGATTCTGGAGGAGGCGTGTACTTGCCCCATATGCCGTAGGAAGATCAAGAAAGTAAGGAAAATATTTCCAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174349.p1 GENE.S_Transcript_174349~~S_Transcript_174349.p1 ORF type:complete len:467 (+),score=67.29,DUF4793|PF16041.1|2.7e+03,DUF4793|PF16041.1|2.8e-28,DUF4792|PF16040.1|7.4e-22,zf-C3HC4_3|PF13920.2|2.4e+03,zf-C3HC4_3|PF13920.2|7.6e-14 S_Transcript_174349:342-1742(+)
MWVFHQMEQQNRTIPLPSSNNDVVVVVDSYSLSSASVPLVVETEVNTQDHNNGHQRRPRNDAYRFSDQGASSFQSGDFRNDAWSCLVVLLAFWFFASITLILGYYGSFTLHLGPYCSYLVEASPIFVNAIKAQQVQYQTEGPMLYGFHKKPSLEVKTNWSQSQKAIVEPGEYKSWAYYLNAGSQINISYDVILPSSTPLSFAIAQGQDNLFDWMNDPSYPNTTLCWKIINGSGNITQDITTSDSYYIALATLNKETAVVDLNITIRSLLYNTSNAYVKCSLNNHVCSFKLLIQRPNAAILTSPGPGQVNDKDDWHVKVSFGAQWVTYLVGSITMTTIMLAMFSCCNKCQVDNVAMENGAEQEPLLSPKDDSGSSGGSSYDSVSSDEDLEEKLLESALEGKVPKEGEANINPRLLCVICFDAPRDCFFLPCGHCAACFTCGSRILEEACTCPICRRKIKKVRKIFPV*

Click here to download the sequence:
Link to NCBI Protein BLAST