Transcript Information: S_Transcript_17443.p1


Annotated TAIR IDAT1G48650.2
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17989517-17995169 | Reverse length=1206
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.91738315905
Replicate 227.643596359584
Replicate 327.757406331557
Condition 2: 8 Hour
Replicate 121.253466572387
Replicate 222.711387657868
Replicate 322.124627657447
Condition 3: 24 Hour
Replicate 130.759658877987
Replicate 229.428558033368
Replicate 331.984784810535


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17443.p1 GENE.S_Transcript_17443~~S_Transcript_17443.p1 ORF type:complete len:1186 (+),score=240.19,HA2|PF04408.19|2.1e-22,OB_NTP_bind|PF07717.12|5.5e-16,Helicase_C|PF00271.27|6.6e-13,dsrm|PF00035.21|2.2e-08,DEAD|PF00270.25|6.5e-07 S_Transcript_17443:172-3729(+)
ATGCCCTGCTCTTCTCTCTTCCGCCCCACGTATCTCCGCACCACCATGTCCCTTTCTCGCCCCTTATCTCTTCTGCAATTCGATAGAGACAGAAACACCCTCAAAACCCTACCTTTTATTAGGGTTCCTCGACTCCTTACTTGGCGCCAATGGCGCCCTCTTTCTTGTAGGGCATTAGCTCTGGGGTCCTGCACTAACTCCCTCGAGCTCCATGATAATGGCCCCCCTTTGCCATATTGGGTTCAGCAGAATCGGGACTTCGGCAGGTTCGCTTACGACGACGACGAGGATGATTTCTCCGAGGATGATTATGATAGAGACTCCACTTCCAGTTCCGGGAGCCAATTATGTTCTTCAACAAGTGCCAATATTGATGAGTGGAAATGGAAGTTGACTATGCTTGTTCGTAACAAAGATGAGCAAGAAGTGGTGTCAAGAGAGAGAAAGGACAGACGTGATTTCGAGCAACTCTCTGCTTTGGCAACTAGAATGGGACTGCATAGCCGCCAATATGCGAAAGTGGTTGTATTCAGTAAAGTTCCCCTGCCAAATTATCGTTCTGATCTGGATGATAAGCGTCCACAACGGGAGGTTATACTTCCCTTGGACCTGGTAAAGGATGTCCATTTCCTTCTCAAAAAGCATCTTTCTCAAAAATCGATGAGCAAGGGGGCTCTTCCAAATTCTTCAATATCACAGAGCTATGACAGTCTAGACAAAGATCAGGCATCATATGATCTACCTGAGCCCCTGGTGGAGATGAGTGCTGCAAAGGAGAGATTCCTTCGGCGGAAAAGCTTGCAGATGCGGGATAAGCAGTGTGATTGGCAGAGTTCTCCAGAGGGTCAGAAGATGCTAGAATTTCAAAAAAGTCTACCAGCATACAAAGAAAGAGATGCTTTGTTGAAAGCCATCTCAGAGAACCAGGTGATAGTTGTCTCTGGTGAAACTGGCTGTGGTAAGACAACTCAACTTCCTCAGTACATTTTGGAATCTGAAATTGAAGCTGCTTGTGGGGCTAGTTGTAGCATTATTTGTACGCAGCCTAGAAGAATATCTGCTATGGCTGTTTCTGAGAGGGTTGCTGCAGAAAGAGGCGAACAACTTGGGGAATCTGTTGGTTACAAAGTAAGATTGGAGGGTATGAAAGGGAGAGACACACGCCTCCTATTCTGCACTACTGGTGTGTTGCTGAGAAGACTTCTTGTTGATAGAGCTTTAAGGGGTGTGACTCATGTCATTGTTGATGAGATTCATGAACGTGGCATGAATGAAGATTTTCTCCTTATCGTGTTGAAAGATCTCCTGCCCCGTCGGCCAGATTTGAGGTTGATATTGATGAGTGCCACCCTGAATGCTGAGCTATTTTCCTCTTACTTTGGTGGGGCTCCTACGCTACACATTCCTGGCTTCACGTATCCGGTCAGAGCTCACTTCTTGGAGAATATTTTGGAAGTGACTGGATATAGGCTTAGCCCCTATAACCAGATTGATGACTACGGTCAAGAAAAGATGTGGAAAATGCAAAAACAAACTATTAGAAAGAGGAAGAGCCAAATTGCTTCTGCAGTTGAGGATGCACTTGAGGCTGCTGATTTTAGCGGATATAGTCGTCGGACTCAAGACTCATTGTCTTGTTGGAACCCCGATTCCATTGGTTTTAATCTAATTGAACAGGTGCTTTCCCATATATGCAAGTCCGAAAGGCCAGGTGCTGTTTTAGTATTTATGACAGGTTGGGAGGATATTAATACTTTGAAGGATCAGCTCCAAGCTCATCCTTTACTTGGAGACCCAAGTAGAGTTCTACTGCTTGCATGTCATGGTTCCATGGCTAGTTCTGAACAGAGGCTGATATTTGATAGACCTCCAGATGGAGTGAGAAAAATAGTACTGGCAACCAATATGGCGGAGACTAGTATCACCATAAATGATGTAGTTTTTGTAGTTGATTGCGGTAAAGCAAAAGAGACATCATATGATGCATTGAATAATACTCCTTGTTTATTACCTTCTTGGATCTCAAAGGCTGCCGCTCGACAGAGAAGAGGTAGAGCAGGCCGTGTTCAACCAGGGGAGTGCTATCATCTTTACCCAAGATGTGTGTATGATGCTTTTGCTGATTACCAGTTACCAGAACTTTTGAGGACACCCCTGCAGTCTCTTTGTTTGCAAATAAAAAGCTTACAGCTTGGTGGCATTTCTGAATTTCTGTCAAAGGCTTTGCAAGCCCCAGAGTCATTGTCGGTTCAAAATGCTGTTGATTATTTGAAGAGCATCGGAGCTTTAGATGAAAATGAAAATCTCACAGTACTTGGTCAACACTTGTCCGTGCTCCCTGTGGAGCCCAAACTAGGGAAAATGCTCATTTATGGGGCTATATTCAGATGCCTGGATCCAATAATGACTGTTGTTGCTGGTTTAAGTGTTAGAGACCCGTTCTTGATGCCATTCGACAAAAAGGACCTTGCAGAATCTGCTAAGGCGCAGTTCTCTGGTCGTGAGTTCAGTGACCATCTAGCTCTGGTTCGGGCTTATGAAGGGTGGAAAGATGCCGAAAGACAGAAATCTGGTCATGAATACTGCTGGACAAACTTCCTATCTGTCCAGACTCTAAAAGCGATTGATTCCTTGCGGAAGCAATTCTTTTATTTACTTAAAGATACGGGTCTTGCTGACCTCGACAAAGAAAGCTGTAATATGTGGAGCCATGATGAGCATCTTGTTCGAGCAATCATCTGTGCGGGTTTGTTCCCTGGTGTTAGTTCGGTCGTGATTAAAGAGAAGTCAATAATGTTAAAAACAATGGAAGATGGTCAGGTCCTTCTGAATATGAATTCAGTGAATGCGCAGGAACCTAAGATACCATATCCATGGCTTGTGTTTAATGAGAAGGTGAAAGTTAATGCAGTATTCTTGAGGGATTCAACAGCAGTGTCAGATTCTGTGTTGTTACTGTTTGGGGGAAAAGTCTCAAGAGGTGGTTTGGATGGATACCTGAAAATGCTGGATGGATACTTGGAATTTTTCATGAAACCTGCCTTGGCAGACATCTATTTGTGCCTTAAGAGAGAACTTGAAGAACTTATCCATAGCAAGCTCTCAGATCCCAAGTTGGATATCAGCAGTCAAATGGACCTCCTGTCTGCAGTAAGAATGTTGGTCTCAGAAGACTTATGTGAGGGTAGATTTGTATTTGGTCGTCAGTTGCCCGTGTCCTCAAAGAAGGCTTCTAAGGGGACAAATGCACAGAGTGATAAAGGCAGTGGTGCTGATAATTCAAAGAGTCAATTGCAAACTTTGCTTAATAGGGCAGGACATGAAGCACCCACATACAAGACAAGACAACTAAAAAACAACCTATTTCGTTCTATTGTAATTTTCAATGGCTTGGAGTTTGTTGGGCAACCTAGTAATAGTAAGAAGCAGGCAGAGAAAGACGCAGCTGCTGAAGCCTTGCGATGGTTGATGGGTGATAACCCGTCATTCCGGGGAGATATAGATCAACTGTCAATGTTCATGAAGAAGAGCAAGAAGAAACACGGCAAACGAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17443.p1 GENE.S_Transcript_17443~~S_Transcript_17443.p1 ORF type:complete len:1186 (+),score=240.19,HA2|PF04408.19|2.1e-22,OB_NTP_bind|PF07717.12|5.5e-16,Helicase_C|PF00271.27|6.6e-13,dsrm|PF00035.21|2.2e-08,DEAD|PF00270.25|6.5e-07 S_Transcript_17443:172-3729(+)
MPCSSLFRPTYLRTTMSLSRPLSLLQFDRDRNTLKTLPFIRVPRLLTWRQWRPLSCRALALGSCTNSLELHDNGPPLPYWVQQNRDFGRFAYDDDEDDFSEDDYDRDSTSSSGSQLCSSTSANIDEWKWKLTMLVRNKDEQEVVSRERKDRRDFEQLSALATRMGLHSRQYAKVVVFSKVPLPNYRSDLDDKRPQREVILPLDLVKDVHFLLKKHLSQKSMSKGALPNSSISQSYDSLDKDQASYDLPEPLVEMSAAKERFLRRKSLQMRDKQCDWQSSPEGQKMLEFQKSLPAYKERDALLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAACGASCSIICTQPRRISAMAVSERVAAERGEQLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRALRGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFGGAPTLHIPGFTYPVRAHFLENILEVTGYRLSPYNQIDDYGQEKMWKMQKQTIRKRKSQIASAVEDALEAADFSGYSRRTQDSLSCWNPDSIGFNLIEQVLSHICKSERPGAVLVFMTGWEDINTLKDQLQAHPLLGDPSRVLLLACHGSMASSEQRLIFDRPPDGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGGISEFLSKALQAPESLSVQNAVDYLKSIGALDENENLTVLGQHLSVLPVEPKLGKMLIYGAIFRCLDPIMTVVAGLSVRDPFLMPFDKKDLAESAKAQFSGREFSDHLALVRAYEGWKDAERQKSGHEYCWTNFLSVQTLKAIDSLRKQFFYLLKDTGLADLDKESCNMWSHDEHLVRAIICAGLFPGVSSVVIKEKSIMLKTMEDGQVLLNMNSVNAQEPKIPYPWLVFNEKVKVNAVFLRDSTAVSDSVLLLFGGKVSRGGLDGYLKMLDGYLEFFMKPALADIYLCLKRELEELIHSKLSDPKLDISSQMDLLSAVRMLVSEDLCEGRFVFGRQLPVSSKKASKGTNAQSDKGSGADNSKSQLQTLLNRAGHEAPTYKTRQLKNNLFRSIVIFNGLEFVGQPSNSKKQAEKDAAAEALRWLMGDNPSFRGDIDQLSMFMKKSKKKHGKRT*

Click here to download the sequence:
Link to NCBI Protein BLAST