Transcript Information: S_Transcript_17449.p1


Annotated TAIR IDAT2G35920.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15075674-15080506 | Forward length=995
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.080565819808
Replicate 212.090069901479
Replicate 313.203724681733
Condition 2: 8 Hour
Replicate 117.477815096767
Replicate 215.930817361494
Replicate 315.240217337535
Condition 3: 24 Hour
Replicate 114.507350648264
Replicate 211.63640997442
Replicate 310.868232186082


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17449.p1 GENE.S_Transcript_17449~~S_Transcript_17449.p1 ORF type:complete len:1042 (+),score=210.82,HA2|PF04408.19|4.3e-23,OB_NTP_bind|PF07717.12|9.3e-19,Helicase_C|PF00271.27|8.8e-15,DEAD|PF00270.25|7.4e-06 S_Transcript_17449:106-3231(+)
ATGTCTTGGCGCAACTATTTTTTCTCTCCTCCTAAACCCACTCTCATTTTCTCTCCTCATACTCGCACTTTCCTAACGTTTCTCTCTCCATTCCCCACCAAAACCCTCCTTCTTCTCTCTTCTCCCCCCCATTTCTCATCCATCATGTCCTACCGCCCTAATTACCAAGGCGGCCGCCGCGGAGGTCGTCGAGGCGGTGGCGGAAGAGGAGGAGGAGGAGGCGGCGGTGTTGGAAGAGGCGGTCGTGGAGAACAGCGATGGTGGGACCCGGTCTGGCGAGCCCAACACCTGGCACAAAAAGCAGCCGAGCTAGAAGTGATGGATGAGAATGAGTGGTGGAATAAATTGGAGCAGTTTCAGAAAGGAGGGGAGCAAGAGGTTATTATTAAGCGTCATTTTAGGAGGGAGGATCAAGATGTTCTTTCTGATATGGCTCATCAACTTGGCCTCTACTTCCATGCATATAACAAAGGGAAGACACTTGTTGCAAGCAAAGTTCCCCTGCCAAATTATCGTGCAGATCTAGATGAACGTCATGGATCCACACAGAAGGAGATACGAATGTCTACTGATACTGAGAAAAGAGTTGGTTCATTGTTAAATAACTCCAAGGGAACAAGTGCTCCTGAAACGTCCACTGGTGCTTCTTCTCAGAGTGCAAGAAGTTCAGCGTCATCAATGAACATTGTGAAATCAGTCTCTTCCACAGAGAATGATGTTGCGAAGGAGAAAATTAGTGCTGAACTCAAGCAGAGAGAAGACAGGATGAAGGGTAGCGAGAGTGTACAGGCAATGCAGGTGTTTAGAGAGAAACTCCCTGCTTTCAAAGTGAGATCTGAATTTCTGAAAGCTGTTGCAGGGAATCAGGTCCTAGTAGTTTCAGGGGAGACTGGATGTGGTAAAACAACCCAGCTTCCTCAATTCATTTTGGAAGAGGAGATTTCACTGCTTCGCGGTGCTTACTGCAACATAATATGTACCCAACCACGTCGTATATCAGCTATATCTGTTGCTGCTCGAATATCTTCTGAAAGGGGAGAGAATCTGGGTGAAACCGTTGGCTATCAGATACGCTTGGAGGCGAAGCGTTCTAAGCAAACACGGTTGCTGTTCTGCACAACAGGAGTTTTACTCAGACAGTTGGTCCTGGATCCATGTTTGACAGGAGTCAGCCATCTGCTAGTGGATGAAATTCATGAAAGAGGAATGTATGAGGATTTCCTTCTTATTATATTAAAGGATCTCCTTCCTCGTCGTCCAGATTTAAGACTTATTCTTATGAGTGCTACTATAAATGCGGAGTTGTTCTCGCAATATTTTGGGAATGCGCCCACTATTCATATTCCGGGCCTTACCTTTCCAGTTGCAGAGCTCTTTCTGGAAGATGTATTGGAGAAAACCCGATATAAGATCACTTCAGATTCAAATAGTTTCCAGGGTAGCTCAAGGCGGCAGAATAGGCAACTGGATTCAAAAAAGGATCCCTTAACTGAATTATTTGAGGAAGTTGACATTGGTTCACAGTACAGGAGTTATAGCGTCGGTACAAGAACATCCCTTGAAGCCTGGTCTGGTTTGCAGCTTGACTTAGGTCTTGTGGAGTCAACAATTGAATATATTTGTCGCCATGAAGGTGATGGGGCAATACTTGTATTTCTCACTGGTTGGGATGAGATCTCTAAGCTACTAGACAAAATAAAGGCAAACAATTTTCTTGGAGACACCAGAAAGTTTCTTGTTCTTCCGCTGCATGGTTCAATGCCAACTGTCAATCAGCGTGAAATATTTGACCAACCACCTGCAAGTACAAGGAAAATTGTTCTAGCAACAAATATTGCAGAGAGTAGCATTACTATTGACGATGTAGTTTATGTTATTGACTGTGGGAAGGCAAAAGAGACTAGCTATGATGCTTTGAACAAGCTAGCTTGCCTGCTGCCATCCTGGATTTCAAAAGCTTCAGCTCATCAGAGAAGGGGTCGTGCTGGTCGAGTGCAACCTGGTGTTTGTTACAGACTGTACCCAAGAATGGTTTATGATGCGATGCCTCAGTATCAGTTGCCAGAAATCCTTAGGACTCCCTTGCAAGAACTTTGTCTAAACATAAAGAGTCTGCAACTTGGGAGCATTGGATCATTTTTGGCAAAAGCGCTTCAGCCACCAGATTCTCTTTCTGTTCAAAATGCTATTGAACTTCTGAAGACAATTGGGGCTCTAGATGATAGAGAAGAGCTTACCCCTCTTGGTCGGCATCTTTGCACCCTGCCTTTGGAGCCAAATATCGGGAAGATGCTTCTGATGGGGTCAATCTTCCAATGCCTGAATCCTGCCTTAACAATTGCAGCTGCTCTTGCACATCGTGATCCCTTTGTCCTGCCAATCAATAGGAAGGAGGAAGCTGATGCTGCTAAGAGGTCTTTTGCTGGTGATAGCTGCAGTGATCATATAGCCCTCCTAAAAGCATTTGAAGGGTGGAAAGATGCAAAAAGCAATAGGGCGGAGAGATCTTTCTGTTGGGAGAACTTCTTGTCGCCTATAACTCTGCAGATGATGGATGATATGCGGAAACAGTTTGTGGATCTACTCTCAGACATAGGCTTTGTGGACAAATCAAAGGGTCCTCAAGCTTACAACCAGTACAGTGACGATTTGGAGATGGTGTGTGCCATTCTCTGTGCTGGACTTTACCCCAATGTCGTGCAATGCAAAAGAAGAGGAAAGCGGACAGCATTTTACACTAAAGAAGTTGGGAAAGTTGACCTTCATCCGGCCTCTGTGAATGCTGGTGTTCATCTTTTCCCCTTACCGTATATGGTGTACAGTGAAAAGGTTAAAACAAGTAGCATTTACATTCGTGATTCAACCAATATATCTGATTATGCTCTCCTCCTGTTTGGCGGTAATCTTCTTCCAAGTAAATCTGGAGAAGGCATTGAGATGCTAGGAGGCTACCTTCATTTTTCTGCATCAAAAAGTGTGTTAGAACTAATAAAGAAATTGCGAGGGGAGCTAGATAAACTTCTGAACCGGAAAATTGAAGAACCAGGCCTAGACATCACCCAAGAGGGAAGAGGAGTTGTTGCGGCTGCAATCGAATTACTGCACAGTCAGAATGTAAGATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17449.p1 GENE.S_Transcript_17449~~S_Transcript_17449.p1 ORF type:complete len:1042 (+),score=210.82,HA2|PF04408.19|4.3e-23,OB_NTP_bind|PF07717.12|9.3e-19,Helicase_C|PF00271.27|8.8e-15,DEAD|PF00270.25|7.4e-06 S_Transcript_17449:106-3231(+)
MSWRNYFFSPPKPTLIFSPHTRTFLTFLSPFPTKTLLLLSSPPHFSSIMSYRPNYQGGRRGGRRGGGGRGGGGGGGVGRGGRGEQRWWDPVWRAQHLAQKAAELEVMDENEWWNKLEQFQKGGEQEVIIKRHFRREDQDVLSDMAHQLGLYFHAYNKGKTLVASKVPLPNYRADLDERHGSTQKEIRMSTDTEKRVGSLLNNSKGTSAPETSTGASSQSARSSASSMNIVKSVSSTENDVAKEKISAELKQREDRMKGSESVQAMQVFREKLPAFKVRSEFLKAVAGNQVLVVSGETGCGKTTQLPQFILEEEISLLRGAYCNIICTQPRRISAISVAARISSERGENLGETVGYQIRLEAKRSKQTRLLFCTTGVLLRQLVLDPCLTGVSHLLVDEIHERGMYEDFLLIILKDLLPRRPDLRLILMSATINAELFSQYFGNAPTIHIPGLTFPVAELFLEDVLEKTRYKITSDSNSFQGSSRRQNRQLDSKKDPLTELFEEVDIGSQYRSYSVGTRTSLEAWSGLQLDLGLVESTIEYICRHEGDGAILVFLTGWDEISKLLDKIKANNFLGDTRKFLVLPLHGSMPTVNQREIFDQPPASTRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPRMVYDAMPQYQLPEILRTPLQELCLNIKSLQLGSIGSFLAKALQPPDSLSVQNAIELLKTIGALDDREELTPLGRHLCTLPLEPNIGKMLLMGSIFQCLNPALTIAAALAHRDPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKDAKSNRAERSFCWENFLSPITLQMMDDMRKQFVDLLSDIGFVDKSKGPQAYNQYSDDLEMVCAILCAGLYPNVVQCKRRGKRTAFYTKEVGKVDLHPASVNAGVHLFPLPYMVYSEKVKTSSIYIRDSTNISDYALLLFGGNLLPSKSGEGIEMLGGYLHFSASKSVLELIKKLRGELDKLLNRKIEEPGLDITQEGRGVVAAAIELLHSQNVRY*

Click here to download the sequence:
Link to NCBI Protein BLAST