Transcript Information: S_Transcript_174500.p1


Annotated TAIR IDAT3G61800.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22874723-22876846 | Reverse length=664
E-Value1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.603714638623
Replicate 26.5609461657916
Replicate 36.1834246344433
Condition 2: 8 Hour
Replicate 18.7042409457686
Replicate 28.5443503551143
Replicate 37.7681660368008
Condition 3: 24 Hour
Replicate 17.3877740084808
Replicate 28.5237075607837
Replicate 38.3828369159861


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174500.p1 GENE.S_Transcript_174500~~S_Transcript_174500.p1 ORF type:5prime_partial len:343 (+),score=101.88,DUF2043|PF09740.5|3.2e-27,DUF2043|PF09740.5|5.7e+03 S_Transcript_174500:2-1030(+)
CCTGAAGGCAGCAAAAGAAGGGAAAATAAAAAGAAGATGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGAAAATAAAAAGAAGATGCTGACTAAAGATGCTCCTGAAGGCAACAAAAGAAGGGGAAATAACAAGGAGAATAGTAAATCTAAGAAAAAGGAGATTAGTAAGTCGAAGCAAGGTATTGGTGATTCGGATCCTTTGAGGAGCAAGCTTTTAGCTGACGCTCCTGTTGTGAAGTGGGGGTCTTCATTGGATAATTGGGGTGAGAAGAGGGATGTTTTTGCTAACCAGAGAGGACTTGAGCTTGCTGGCCATTGGGGTAGAGTAGATTACGATGCAACTATACCTGCTGACAAAATTGCTGAACTAAATGTTCATGCAACTATTTACAAAGAAGAGCAAGCTGAAATTCAAGTATGTGGTGCTCCTTTGAGTAAGGGAGGGCTTTGCCAGAGGAGAGATTTGAAAACTTGCCCCTTTCACGGTCCCATTATACCCCATGCTGATGAAGGGAGGCCTATTGATTCTGGGAATGATGAGGGACTACCTGCTACCTCCATGGATAGCAGTAGAAAATCCATGAGCCGAAGTCCTTCCACAGAGGACATTGATATGGATGGAAAGAGCATTCTGGTAGAGGAATTAGCTAAACAGGCTGTGAAAAATGTCAGGGAGAGGGATAAAGAGGATGCTAAGAAGAAAGACATTGATAAACGAGCAGTTAAAAAAGCAAAGCTTGCAAAAGTTCGGGAACACAATGAAGCTGTTTTGCGGGAGGCTGCAATGGCGTCAACCTCTATGTCTGCTGGTATAGGAGAATTTGAAGGTACAAGCAGTAGGGAGACTGCTACTGCCAGAAGTAAGAAGCCCACACTTGCATCGATGTTGCGTAAGAAAGTAACAGCCAAAGATAGGATAGCTCAGAAGCTATTGAGTGCACGAGCAAGACATGTGGCCATCAAGCAGCTGACCCAGGGAGAGGATATCAAGTACAAAGAATCATTTCCAAATCAATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174500.p1 GENE.S_Transcript_174500~~S_Transcript_174500.p1 ORF type:5prime_partial len:343 (+),score=101.88,DUF2043|PF09740.5|3.2e-27,DUF2043|PF09740.5|5.7e+03 S_Transcript_174500:2-1030(+)
PEGSKRRENKKKMLTKDAPEGSKRRENKKKMLTKDAPEGNKRRGNNKENSKSKKKEISKSKQGIGDSDPLRSKLLADAPVVKWGSSLDNWGEKRDVFANQRGLELAGHWGRVDYDATIPADKIAELNVHATIYKEEQAEIQVCGAPLSKGGLCQRRDLKTCPFHGPIIPHADEGRPIDSGNDEGLPATSMDSSRKSMSRSPSTEDIDMDGKSILVEELAKQAVKNVRERDKEDAKKKDIDKRAVKKAKLAKVREHNEAVLREAAMASTSMSAGIGEFEGTSSRETATARSKKPTLASMLRKKVTAKDRIAQKLLSARARHVAIKQLTQGEDIKYKESFPNQW*

Click here to download the sequence:
Link to NCBI Protein BLAST