Transcript Information: S_Transcript_174504.p1


Annotated TAIR IDAT3G61800.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22874723-22876846 | Reverse length=664
E-Value6.6E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8709930461739
Replicate 26.5386085415908
Replicate 37.3100299385908
Condition 2: 8 Hour
Replicate 16.7078045906618
Replicate 27.1589915647125
Replicate 36.8598273201485
Condition 3: 24 Hour
Replicate 110.128082345639
Replicate 28.8594899798449
Replicate 38.7130698854037


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174504.p1 GENE.S_Transcript_174504~~S_Transcript_174504.p1 ORF type:5prime_partial len:550 (-),score=148.79,DUF2043|PF09740.5|1.6e+04,DUF2043|PF09740.5|1.4e-29 S_Transcript_174504:192-1841(-)
AAGAACAATCTTAAGCTTCAGTTTCCAGATATACAAGGGACTGCGTCTCGAATTCAGCGAGAGAGGAGGGAGAGGGAGTTGAGGACACAGGAGATTTTCAGGAACAAATTCGAATCGTTGAGGGAGAGTCTCAGTTCGATTAGGGAGGAGATAAATTCGACGATCGATGAAATTGCGGAGTGCTTAGAGATTGCTAAAGCGGATGATGAGGATGGGTTGGGAATGGAGCCTTTGGATGATGAGGAGGGGGAGGAAGATTTTGGTGTGATTCGTAACCCTGAGTTAAGACAGATTAGGATGAGTTCATTGATGGAAGCTGACAAGGTTCATGAGAACAACGAGAATAGAGTCTTGTTTGATGTGTTGAGGGAGCTTTACAAGTTGTTGGTGACCAAGCATTTGGTTTCGGTACAGCAGTGGATATCGGTTCTTATTAGGGTTGAAGTGAATGACACTAGGTTTAGGGACTCAACTCTCAAAGAGTTTATTGATTTTAAGAACCGGATTTTTGCTGCAAAGAAGAAATGTGAGGAGTCAGGGTGTGCCCTTCCCATCACCAAGGGTAGCGTGGAAGATGATATTTGGGTGGAGGGTGAAGTTGGGTTTGTGAATAGTAAGGATTTGTCAGCTGTATCGAATTCGACTTCAACTGCTAATGTGGTGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGAAAATAAAAAGAAGATGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGGAAATAACAAGGAGAATAGTAAATCTAAGAACAATGAGATTAGTAAGTCGAAGCAAGGTATTGGTGATTCGGATCCTTTGAGGAGCAAGCTTTTAGCTGACGCTCCTGTTGTGAAGTGGGGGTCTTCATTGGATAATTGGGGTGAGAAGAGGGATGTTTTTGCTAACCAGAGAGGACTTGAGCTTGCTGGCCATTGGGGTAGAGTAGATTACGATGCAACTATACCTGCTGACAAAATTGCTGAACTAAATGTTCATGCAACTATTTACAACGAAGAGCAAGCTGAAATTCAAGTATGCGGTGCTCCTTTGAGTAAGGGAGGGCTTTGCCAGAGGAGAGATTTGAAAACTTGCCCCTTTCATGGTCCCATTATACCCCGTGATGATGAAGGGAGGCCTATTGATTCTGGGAATGATGAGGGAATACCTGCTACCTTCATGGATAGCAGTAGAAAATCCATGAGCCGAAGTCCTTCCTCAGAGGACATTGATATCGATGGAAAGAGCAGAGTAGAGGAATTAGCTAAACAGGCTGTGAAAAATGTCAGGGAGAGGGATAAAGAGGATGCTAAGAAGAAAGACATTGATAAACGAGCAGTTAAAAAAGCAAAGCTTGCAAAAGTTCGGGAACACAATGAAGCTGTTTTGCGGGAGGCTGCAATGGCGTCAACCTCTATGTCTGCAGGTATAGGAGAATTTGAAGGTACAAGCAGTAGGGAGACTGCTACTGCCAGAAGTAAGAAGCCCACACTTGCATCGATGTTGCGTAAGAAAGTAACAGCCAAAGATAGGATAGCTCAGAAGCTATTGAGTGCACGAGCAAGACACGTGGCCATCAAGCAGCTGACACAGGGAGAGGATATAAAGTACAAAGAATCATTTCCAAATCAATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174504.p1 GENE.S_Transcript_174504~~S_Transcript_174504.p1 ORF type:5prime_partial len:550 (-),score=148.79,DUF2043|PF09740.5|1.6e+04,DUF2043|PF09740.5|1.4e-29 S_Transcript_174504:192-1841(-)
KNNLKLQFPDIQGTASRIQRERRERELRTQEIFRNKFESLRESLSSIREEINSTIDEIAECLEIAKADDEDGLGMEPLDDEEGEEDFGVIRNPELRQIRMSSLMEADKVHENNENRVLFDVLRELYKLLVTKHLVSVQQWISVLIRVEVNDTRFRDSTLKEFIDFKNRIFAAKKKCEESGCALPITKGSVEDDIWVEGEVGFVNSKDLSAVSNSTSTANVVLTKDAPEGSKRRENKKKMLTKDAPEGSKRRGNNKENSKSKNNEISKSKQGIGDSDPLRSKLLADAPVVKWGSSLDNWGEKRDVFANQRGLELAGHWGRVDYDATIPADKIAELNVHATIYNEEQAEIQVCGAPLSKGGLCQRRDLKTCPFHGPIIPRDDEGRPIDSGNDEGIPATFMDSSRKSMSRSPSSEDIDIDGKSRVEELAKQAVKNVRERDKEDAKKKDIDKRAVKKAKLAKVREHNEAVLREAAMASTSMSAGIGEFEGTSSRETATARSKKPTLASMLRKKVTAKDRIAQKLLSARARHVAIKQLTQGEDIKYKESFPNQW*

Click here to download the sequence:
Link to NCBI Protein BLAST