Transcript Information: S_Transcript_174520.p1


Annotated TAIR IDAT5G58250.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23559558-23560372 | Forward length=211
E-Value3.9E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1115.60022411532
Replicate 296.065062865012
Replicate 3112.38542300944
Condition 2: 8 Hour
Replicate 159.089102337056
Replicate 269.912026999146
Replicate 367.944264240878
Condition 3: 24 Hour
Replicate 191.475449616863
Replicate 2106.7087795053
Replicate 3113.76192945224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174520.p1 GENE.S_Transcript_174520~~S_Transcript_174520.p1 ORF type:complete len:96 (-),score=17.14,Ycf54|PF10674.5|1.2e-10 S_Transcript_174520:39-326(-)
ATGTTGGGGAATTTCTCAAGAAACTTAGGTTCAATAACAAAGAGATTAAATAGACCTGCTGTGGCCTTGGTATCAACCAATGGCCCATGGATCACATTTATGAAACTAAGATTGGATCGTGTGTTAGCTGAAAGTTATGAAGCAGACAGCTTAGAAGAAGCATTGGCCTCAAATCCTACTAAAATAGAGTTCGAGAAACCAGAAAAGTGGTTGGCACCTTATCCCAAATATGAATACGGTTGGTGGGAGCCTTTCCTACCTCCTGGATCCCAAAAGCCTGAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174520.p1 GENE.S_Transcript_174520~~S_Transcript_174520.p1 ORF type:complete len:96 (-),score=17.14,Ycf54|PF10674.5|1.2e-10 S_Transcript_174520:39-326(-)
MLGNFSRNLGSITKRLNRPAVALVSTNGPWITFMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWLAPYPKYEYGWWEPFLPPGSQKPEA*

Click here to download the sequence:
Link to NCBI Protein BLAST