Transcript Information: S_Transcript_174559.p1


Annotated TAIR IDAT4G28010.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13930379-13932493 | Forward length=704
E-Value5.8E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3142222832188
Replicate 21.4526939626347
Replicate 31.0372457879666
Condition 2: 8 Hour
Replicate 12.2524760691622
Replicate 23.0995290982337
Replicate 33.011704119771
Condition 3: 24 Hour
Replicate 10.98886303866887
Replicate 21.6477119527386
Replicate 31.0379442142023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174559.p1 GENE.S_Transcript_174559~~S_Transcript_174559.p1 ORF type:complete len:729 (+),score=150.38,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.8e-18,PPR_2|PF13041.2|5.3e-18,PPR_2|PF13041.2|4.3e-13,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|5.9e-14,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3.5e-14,PPR_2|PF13041.2|3.1e-07,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|0.00015,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|5.6e-14,PPR_1|PF12854.3|8.9e-08,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|9.5e-09,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|5.9e-09,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.00092,PPR_1|PF12854.3|4.9e-10,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.3e+03,PPR|PF01535.16|0.12,PPR|PF01535.16|4,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|7.2e-11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|0.23,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.47,PPR|PF01535.16|0.091,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.01,PPR|PF01535.16|0.00014,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.6e+03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.1e-06,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|2e+03,MRP-S27|PF10037.5|0.0039,MRP-S27|PF10037.5|0.03,MRP-S27|PF10037.5|0.65,MRP-S27|PF10037.5|3e+02,ATP13|PF12921.3|31,ATP13|PF12921.3|0.36,ATP13|PF12921.3|1.1,ATP13|PF12921.3|6e+02,ATP13|PF12921.3|3.2e+02,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|9.3e+02,ATP13|PF12921.3|21,TPR_14|PF13428.2|3.8e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|4.5e+03,TPR_14|PF13428.2|8,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|80,TPR_14|PF13428.2|1.6e+02,TPR_19|PF14559.2|7.5e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|64,TPR_19|PF14559.2|22,TPR_19|PF14559.2|19,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|6,TPR_19|PF14559.2|7.3,TPR_19|PF14559.2|1.4e+03,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|11,TPR_16|PF13432.2|1.2e+02,TPR_16|PF13432.2|89,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|4.3e+03,TPR_16|PF13432.2|6.8e+02,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|6.7e+02,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|5.7e+02,SPOB_a|PF14689.2|2.7,SPOB_a|PF14689.2|1.1e+03 S_Transcript_174559:294-2480(+)
ATGCCAAAGAGACTATTTTTCTTTAAACTTCCTTCAAACCCTCGTCATTATGCTCAATTCAACATCCCCTTTAAATTCTCAACTCTCTCATCTCTCTTTTCTGTCCATGAAAATGGGTTAGATTCCCATATAGTATTGCTATGTGGAAAACCCACTTCAATCAAAAAAGCTGCTTGTTTGTTTGATGAAGCCTTTAGCTCAGGCAACAAAACCCCATCTGAGAGAACATGTAATCACCTAGTTAATGAGCTTAGAAAGGCAGGTGAACATGAATTAGCCTTCACAGTCTATAAGAAAATGACCCATTTTGGTTTTAAGCCATTTTTCTTTTCACTGGCTGCTTTGGTTGAGTATTTTGTGCATATAGATAAACCCCACTTTGCATTAGGGGCAATTGGGTCTCTTTTAAAGCATGGTTTTGATGCTAATGTGTATCTTATGAATCTTACTTTGAAAAGTTTTTGTCAAACTGGGGAGGTTAATAGAGCAAGGCAGGTCTTGTGTGGAATGAGGGATTGTTCTGTGGTGCCTAATGTTGTTAGCTATAACACAGTGGTAACTGGTCTTTGTAGGGAAAATAGGATGGTGGATGCTTTGAGTTTGATTGATGAGATGAAGAAATCAGGGTGTTGTCCTGATTTGAAATCTTATACTGCTCTTATAGATGGGTTTTGTAAGAATGGTGAAGTGGAAGATGCTATGGAGTTGATGGATGAGATGAAGAAGAATGGTTTTGATGGGGATGTTGTTACTTATAGTGCACTCATTAGTGGGTTTTGTAATCTAGGTAATGCAGATAGAGGTAAAGAGATTTTTCATGAAATGTTGGGGAAGGGATTGGTTCCCAATGTGCTTACATATGCTAGTTTGGTGCAAGGTCTTTCGAAGTCAGGACGGTGGGAAGAAGCCACAGCAGTGCTGAATGAAATGGCAGAAAGAGGGCTGTATCCTGATCAATATATTTATACTAGTCTGATTGATGGGCTCTGTAAGACTGGCCAGGTTAGGAAAGCTGTTCATCTATTTAATAAACTGCTCGAGAAGGGTGAGGGGCTGGATACTATTGCATACAATGCGCTGATTCATGGATTTTGTAGAGAAGGTTTGGTTGCTGAATCCTTTGACTTATTGGAAATGATGTTGGAAAAGGGCAAGAAGCCTGATCTGTGGACATACGAAATAGTGCTTAGGGGTCTTTTTGATGCTGGTAAAGTCGATGAAGCATTAGCAATATTCAGTTCGGTGTTTGAAGACAAGGGTTATATTCAGCCACAAGTAACAACATATAACACAATGATCCTCGGGCTTTGCAAGGAAGGTTGTTTTGAAGAGGCTTTACAGTTTTATGATAAGATGGTAGCAGCAGGTCACTCTGGTAATTCATTCACTTATAATGTACTGATTTGGGCGTCTCTGAGGGAAGGGAGAGTTGCTAAAGCTATAGAACACTGGAAAAACATTTCCAACGCTGGATTAGTTCCAGATTCACACACCTTTAGCCACATGATAGATGGATTCTGCAAACTACAAATGACAAACATTGCAAAAGGTCTTTTGCTGAAGTTGAAAGCCCTTGGGTTTTGTCCAACAGTGATGGACTATAATACCTTGATGTCAACCTTGTGTAGAGAAGGTAGTTTGGAGCAAGCAAAGAGGTTGTTCGAAGAAATGAAGGAAACAAACTGCAAACCAGATATTATCTCCTTCAATACAATGATGTGTGGAGCCCTTAAAGCTGGTGATTACGATTATGTCAAATCACTGCTCAATGATTTGCATCAAAGGGGTTTGGTCCTGGATGGTGTCTCCTTTGCCACGCTAATTGTTGGGTTGGCGAAGATTGGGCAGTTGGATGAAGCCAAACAAATTTTGAAAAGGATGGTTGCTAGTGGCTTCACACCTACTACTCTTGTTTATGATTCTCTACTGAAAGCTTATTGCGAGAATGGTGATATGGATGAAGTTATTAACCTGCTACATCGAATGGCAGCTGAGAACATTGTGCTTGACTCTGATATCAGAGCTACTATCTTGTCATGTCTGTGTCAAAATGCTGATTTTGATATGGTGGATCGTATGCCAACATTCTCTCAAGAAGAAGCTTTAGAAGAAGATGTCATCCCCTGCAAAGATTTCCTGGCAGAACTTCAAAAGCTACATTCCAATTTCAGAAAACTAGCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174559.p1 GENE.S_Transcript_174559~~S_Transcript_174559.p1 ORF type:complete len:729 (+),score=150.38,PPR_2|PF13041.2|0.07,PPR_2|PF13041.2|3.7e-09,PPR_2|PF13041.2|2.8e-18,PPR_2|PF13041.2|5.3e-18,PPR_2|PF13041.2|4.3e-13,PPR_2|PF13041.2|2.7e-15,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|5.9e-14,PPR_2|PF13041.2|9.3,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|3.5e-14,PPR_2|PF13041.2|3.1e-07,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|0.00015,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|5.6e-14,PPR_1|PF12854.3|8.9e-08,PPR_1|PF12854.3|4.9e-08,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|9.5e-09,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|5.9e-09,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.00092,PPR_1|PF12854.3|4.9e-10,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.3e+03,PPR|PF01535.16|0.12,PPR|PF01535.16|4,PPR|PF01535.16|3.3e-08,PPR|PF01535.16|7.2e-11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1e-05,PPR|PF01535.16|2.4e-07,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|0.23,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.47,PPR|PF01535.16|0.091,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.01,PPR|PF01535.16|0.00014,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.6e+03,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|1.1e-06,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|2e+03,MRP-S27|PF10037.5|0.0039,MRP-S27|PF10037.5|0.03,MRP-S27|PF10037.5|0.65,MRP-S27|PF10037.5|3e+02,ATP13|PF12921.3|31,ATP13|PF12921.3|0.36,ATP13|PF12921.3|1.1,ATP13|PF12921.3|6e+02,ATP13|PF12921.3|3.2e+02,ATP13|PF12921.3|2.5e+03,ATP13|PF12921.3|9.3e+02,ATP13|PF12921.3|21,TPR_14|PF13428.2|3.8e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|4.5e+03,TPR_14|PF13428.2|8,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|1.9e+02,TPR_14|PF13428.2|5.1e+02,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|7.4e+03,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|80,TPR_14|PF13428.2|1.6e+02,TPR_19|PF14559.2|7.5e+03,TPR_19|PF14559.2|3.7e+02,TPR_19|PF14559.2|64,TPR_19|PF14559.2|22,TPR_19|PF14559.2|19,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|6,TPR_19|PF14559.2|7.3,TPR_19|PF14559.2|1.4e+03,TPR_16|PF13432.2|1e+04,TPR_16|PF13432.2|11,TPR_16|PF13432.2|1.2e+02,TPR_16|PF13432.2|89,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|4.3e+03,TPR_16|PF13432.2|6.8e+02,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|6.7e+02,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|69,SPOB_a|PF14689.2|1.3e+03,SPOB_a|PF14689.2|5.7e+02,SPOB_a|PF14689.2|2.7,SPOB_a|PF14689.2|1.1e+03 S_Transcript_174559:294-2480(+)
MPKRLFFFKLPSNPRHYAQFNIPFKFSTLSSLFSVHENGLDSHIVLLCGKPTSIKKAACLFDEAFSSGNKTPSERTCNHLVNELRKAGEHELAFTVYKKMTHFGFKPFFFSLAALVEYFVHIDKPHFALGAIGSLLKHGFDANVYLMNLTLKSFCQTGEVNRARQVLCGMRDCSVVPNVVSYNTVVTGLCRENRMVDALSLIDEMKKSGCCPDLKSYTALIDGFCKNGEVEDAMELMDEMKKNGFDGDVVTYSALISGFCNLGNADRGKEIFHEMLGKGLVPNVLTYASLVQGLSKSGRWEEATAVLNEMAERGLYPDQYIYTSLIDGLCKTGQVRKAVHLFNKLLEKGEGLDTIAYNALIHGFCREGLVAESFDLLEMMLEKGKKPDLWTYEIVLRGLFDAGKVDEALAIFSSVFEDKGYIQPQVTTYNTMILGLCKEGCFEEALQFYDKMVAAGHSGNSFTYNVLIWASLREGRVAKAIEHWKNISNAGLVPDSHTFSHMIDGFCKLQMTNIAKGLLLKLKALGFCPTVMDYNTLMSTLCREGSLEQAKRLFEEMKETNCKPDIISFNTMMCGALKAGDYDYVKSLLNDLHQRGLVLDGVSFATLIVGLAKIGQLDEAKQILKRMVASGFTPTTLVYDSLLKAYCENGDMDEVINLLHRMAAENIVLDSDIRATILSCLCQNADFDMVDRMPTFSQEEALEEDVIPCKDFLAELQKLHSNFRKLAA*

Click here to download the sequence:
Link to NCBI Protein BLAST