Transcript Information: S_Transcript_174576.p1


Annotated TAIR IDAT5G38730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15510901-15512691 | Forward length=596
E-Value2.2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5427826803003
Replicate 20.95925171989195
Replicate 32.1382882415769
Condition 2: 8 Hour
Replicate 12.1634453944918
Replicate 22.1074929878003
Replicate 32.3169399570632
Condition 3: 24 Hour
Replicate 11.424666314604
Replicate 22.1349967426994
Replicate 32.5587581280553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174576.p1 GENE.S_Transcript_174576~~S_Transcript_174576.p1 ORF type:internal len:138 (-),score=21.37,PPR_2|PF13041.2|8.5e-13,PPR_2|PF13041.2|2.5e-16,PPR_2|PF13041.2|3.6e-15,PPR_2|PF13041.2|7.7e-07,PPR_1|PF12854.3|7e-14,PPR_1|PF12854.3|7.6e-06,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|8.4e-12,PPR|PF01535.16|4e-10,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|1.4e-06,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.013 S_Transcript_174576:1-411(-)
AAGATGTTGAGTCTTGGGGTGTCGCCGAATCTTTATGTGTATAATGTGTTGATTCATGGTTGTTGTAAGTCGGGTAATGTGGAGAAAGCAGAAGAATTGTTGAGTGAGATGGAAATGAAGTACATAATCCCTGATCTCTTCACTTATAACACGCTGATTTCGTTGTATGTGAAGAAAGGTAAGCACTATGAAGCTATGTCGGTCCAAGATAGGATGGAAAAAGCTGGTGTGGCTCCGGATATTGTGACTTACAATAGTCTTGTATATGGATATTGTAGAGAAGCTAGGATGAGGGAGGCACTAATAATTTTTAGTGAAATTAAAGGTGCCAGTCCTAATGTTGTGACTTATACTACTTTGATTGATGGATACTGTCGGGCTAATGACTTGAATGAAGTGTTGAGATTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174576.p1 GENE.S_Transcript_174576~~S_Transcript_174576.p1 ORF type:internal len:138 (-),score=21.37,PPR_2|PF13041.2|8.5e-13,PPR_2|PF13041.2|2.5e-16,PPR_2|PF13041.2|3.6e-15,PPR_2|PF13041.2|7.7e-07,PPR_1|PF12854.3|7e-14,PPR_1|PF12854.3|7.6e-06,PPR_1|PF12854.3|6.8e-10,PPR_1|PF12854.3|8.4e-12,PPR|PF01535.16|4e-10,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|1.4e-06,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.013 S_Transcript_174576:1-411(-)
KMLSLGVSPNLYVYNVLIHGCCKSGNVEKAEELLSEMEMKYIIPDLFTYNTLISLYVKKGKHYEAMSVQDRMEKAGVAPDIVTYNSLVYGYCREARMREALIIFSEIKGASPNVVTYTTLIDGYCRANDLNEVLRLQ

Click here to download the sequence:
Link to NCBI Protein BLAST