Transcript Information: S_Transcript_174667.p1


Annotated TAIR IDAT3G04820.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1321453-1325949 | Reverse length=715
E-Value2.7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.129036416038
Replicate 20.93599713274305
Replicate 31.7883865293188
Condition 2: 8 Hour
Replicate 12.8433853756177
Replicate 22.3049783446991
Replicate 31.8086173725439
Condition 3: 24 Hour
Replicate 11.191539099487
Replicate 21.6482772055525
Replicate 31.9871913773728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174667.p1 GENE.S_Transcript_174667~~S_Transcript_174667.p1 ORF type:5prime_partial len:165 (-),score=31.66 S_Transcript_174667:40-534(-)
GATCTAAATGTTGTTCACTTAACTTCATTGCAAGTCCCCCCTGAGTTGGTGGAAAAGAAGGAAGAGAAGAAGGTGGCTGAGCAATCAGATAAAAGCTATACGTCCGAAATTGAATCATTTAGGTCAATAGTAGGTGATTCGGATGCTGATCGGTTGAAAGAGTTCATTGAGAAAGTTAATAGTGGTAGTGAAGATCATGTTGCTCCATTACTTCTTTCTCCAAGTTCGGATAAATCCCATCGCACGGCAGTGCACAACTTCTTCAAGGAGAAACTGAAATTCCTGGTCACTGACACAATAGATGGGCCTGATGCCTCGTCGAAGTGCATTCGTGCGAGGCTGAATTCTGGAGGGAATACGAACAGGGGTAGACACTCTCGAAAGCGAAAAGATAGGGATGATAAGCCATTTGATAGAAGAGGGTCAGATAATTGGCCAGAGCATCTTGGCAAGTTCCTTAGGTATCGCATTCTTTTTATGTGCTTACAATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174667.p1 GENE.S_Transcript_174667~~S_Transcript_174667.p1 ORF type:5prime_partial len:165 (-),score=31.66 S_Transcript_174667:40-534(-)
DLNVVHLTSLQVPPELVEKKEEKKVAEQSDKSYTSEIESFRSIVGDSDADRLKEFIEKVNSGSEDHVAPLLLSPSSDKSHRTAVHNFFKEKLKFLVTDTIDGPDASSKCIRARLNSGGNTNRGRHSRKRKDRDDKPFDRRGSDNWPEHLGKFLRYRILFMCLQL*

Click here to download the sequence:
Link to NCBI Protein BLAST