Transcript Information: S_Transcript_174784.p2


Annotated TAIR IDAT5G12020.1
Annotated Gene Name17.6 kDa class II heat shock protein
Annotated Gene Symbol(s)HSP17.6II
Annotation TypeHomolog
Chromosome Positionchr5:3882409-3882876 | Reverse length=155
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9106770117565
Replicate 23.6205603376435
Replicate 31.3240938726688
Condition 2: 8 Hour
Replicate 10.43744390394119
Replicate 20
Replicate 30.76518427299933
Condition 3: 24 Hour
Replicate 10.44810017416603
Replicate 25.9274584122755
Replicate 31.0347505396971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_174784.p2 GENE.S_Transcript_174784~~S_Transcript_174784.p2 ORF type:5prime_partial len:195 (+),score=-8.11,HSP20|PF00011.17|2.1e-19 S_Transcript_174784:3-587(+)
CCATATAAGTGCTCGTGTTGCCCGGCCCGCTACATTTTGCGAGTTCTAGCAAGCCAGCTTCAGTCAACGATCATTGCGAACTTCAAACCCTTTCGCGCTACAAGCTTTCAACACAAGATGATGAGCAAGCGCGAGATGGCTCAGTACGCGCCGGAGTACTATGACCCGTTCTACGCAATGCTGCCCTTCGCCCTGGGCAGCAGCTTAAGCGAGGGCAGCCATAATGGGCACGGCCGGAGCAAGCCCTTCAGGGACATGCCGCTCGACGTCGCCGAGGACGACAAGGCAATCACGGTGGCGGCGGACATCCCGGGCGTGGGCAAGGACAGCATCGCCATCAGCGCGGAGAAGGACGTGCTGACGCTCAAGGTGGACGCTAAGCACGAGAACAAGCAGGACAAGGAGGAGGGCGGCGTCAAGTGGCACCACACGGAGCGCAGCCGCACGTTTGTGCAGCGCAGCCTGCGCATGCCGGAGACGGCAGACATGGACAGCATCAGCGCGACCTACACCGACGGCACGCTGCGCATCACGGTGCCCAAGCGCGAGGCGCCGGCGCAGAGCAAGCGCATCGCGATTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_174784.p2 GENE.S_Transcript_174784~~S_Transcript_174784.p2 ORF type:5prime_partial len:195 (+),score=-8.11,HSP20|PF00011.17|2.1e-19 S_Transcript_174784:3-587(+)
PYKCSCCPARYILRVLASQLQSTIIANFKPFRATSFQHKMMSKREMAQYAPEYYDPFYAMLPFALGSSLSEGSHNGHGRSKPFRDMPLDVAEDDKAITVAADIPGVGKDSIAISAEKDVLTLKVDAKHENKQDKEEGGVKWHHTERSRTFVQRSLRMPETADMDSISATYTDGTLRITVPKREAPAQSKRIAIE*

Click here to download the sequence:
Link to NCBI Protein BLAST