Transcript Information: S_Transcript_175313.p2


Annotated TAIR IDAT3G61870.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22902702-22903895 | Forward length=272
E-Value3.2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.762125360261
Replicate 26.6648010121659
Replicate 311.718821886454
Condition 2: 8 Hour
Replicate 112.439811018328
Replicate 214.215445489826
Replicate 38.6595630895237
Condition 3: 24 Hour
Replicate 15.2336700029548
Replicate 28.9710920823042
Replicate 39.1955370226986


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_175313.p2 GENE.S_Transcript_175313~~S_Transcript_175313.p2 ORF type:complete len:96 (-),score=19.59,DUF4079|PF13301.2|1.7e-19 S_Transcript_175313:174-461(-)
ATGGGCTACTTTTACTCCCTGCAAGTTTCACTGAGAAGCTTGTATGGATGTTCAGAAGATTATAATCCTGTACTGAAACATTGTTCATGTTGTTTCGCTTGGAAATTAGCCATCACAGTGCTATGGGCAGCTGCTGCAGCTCTTGTTCCTGCTATGCAGAAAGGAAATGAGACAGCCAGAAGTCTTCACATTGCTCTGAATGCTGTAAATGTTGCTCTGTTCATATGGCAGATCCCCACTGGGTTTGATATAGTCCTCAAAGTGTTCGAGTTCACCAAATGGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_175313.p2 GENE.S_Transcript_175313~~S_Transcript_175313.p2 ORF type:complete len:96 (-),score=19.59,DUF4079|PF13301.2|1.7e-19 S_Transcript_175313:174-461(-)
MGYFYSLQVSLRSLYGCSEDYNPVLKHCSCCFAWKLAITVLWAAAAALVPAMQKGNETARSLHIALNAVNVALFIWQIPTGFDIVLKVFEFTKWP*

Click here to download the sequence:
Link to NCBI Protein BLAST